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Simple sequence repeat (SSR)
>UN36324
TTTTTATTTTCCTTTTCCTCTCTCTCTCTGCCAATCACTTTGTATATTCCAAGTTCACTTTAATATTCTTTCCTTCTGGAAGGCAAATCACACG
AAATTATCATATCCCGTGTGACCATGTCCAAAGTTCTCGAGCCCCTAGAAGAAGAGAAAGTAGAACATAAAGCAAGAAACCAAGAAGAAGAAGA
AGAATCGAAGAAAGAAGAGTTGGTGGGATCGCTGTGTACACCAACATCAAGTGATCATAAGATTCCGGAGGTGGATACTTGTCCTCCGGCGCCA
AGAAAGCGACCGCGTGAGATTCCTCCGACAAAGAAGAGAAGATTGTCCAAAAATCCTCGGTTCTTTGAAGCCACCGACGTCGGGAGCCACGAGG
TAGAGACTCTCTTTGTTCATAACTCAAACCCTGTCCGTAAGAAACGGAAGAGTAATAGCGCCTGAATCTCTACTGTATTTTTTCTTCCCCACAA
ACTTGATTGTGTAATCCTTTCGTCGATCCTTTCTATACCTTGATTTTTAACTCGTTTCGTGTTTTATTACTTACTTTTTTTTATGGGATTTGAA
CTCTGTTTATGTACAGAGAGTTTTTGTTAATATATATCGATCTTGTCTAACTCTCTTACAATTTGATTCTCATGTCTCAAAGTATGATGTTGAT
ATTTGTTTGTAAGAGTTAGCAATAAAAATAACTTAAGTTAATAGTACGTGGAGTTTTATTTTTCTTCTCC |
Primers for UN36324 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTCTGGAAGGCAAATCAC |
59.67 |
20 |
GAACCGAGGATTTTTGGACA |
59.91 |
20 |
274 |
72 |
345 |
| 2 |
CCTTCTGGAAGGCAAATCAC |
59.67 |
20 |
TCCACCTCCGGAATCTTATG |
59.887 |
20 |
192 |
72 |
263 |
| 3 |
CGTGTGACCATGTCCAAAGT |
59.441 |
20 |
TCCACCTCCGGAATCTTATG |
59.887 |
20 |
155 |
109 |
263 |
|
|
