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Simple sequence repeat (SSR)
>UN36392
GAACATCAAAGAGTGAGCAGATCAGAATCAATGGCTCAGGCTCATCCAGAGCTGGAGACAAACAAAACCAATGGAGAGAGAGAGAAAGCAACGC
AAGTGGAAACAAGAGAGTGGCCAAGGATCTACATTGCCTTGTCTAGGAAAGAGAAGGAAGAAGATTTCTTGGTTACGAAAGGCACATGCTTCCT
CACCGACCCAGGAAACGAGCTAAGAACATTGATAAATCCCTGCAGTATTGTTTCCCAGGGATGTGGTTATCTGATTTGACCAAAATCGTTATGA
AGTTAGGGAGAAGAAAAATGTGAAGAAGCAGCCGAAACGGAGAGGATTGAAAGGGTTGGAGAATTTGGATACCGACTCCGAGTAAATTCTGCTT
CTTTTTCTGGTTATCGATTGAGTTTATATAAAGAGTTGGGGAGGACGAATGTACGTGTGGCTTGCTTGTGATGCTCGTGCCAACAAGAACCCAG
TGGAGCGAGAGAGCTATCGAGAAGTTCACCCTTTTTCTTTTTGTTGCTGTTAGTGTAACAAAGAGAAGAAGGTGACAATGCATCTAAATAAACA
TAATTCAGTTTTTAATCTTTTTTTGTCACAAATTCAGTTTTTTTAATCATTTACAAAAATGAAACGAAAAACGGAATCCTTACCTGTTTTGAAA
CCC |
Primers for UN36392 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCAATGGCTCAGGCTCATC |
60.189 |
20 |
TCCCTGGGAAACAATACTGC |
59.933 |
20 |
223 |
27 |
249 |
2 |
ATCAATGGCTCAGGCTCATC |
60.189 |
20 |
GGGAAACAATACTGCAGGGA |
59.933 |
20 |
218 |
27 |
244 |
3 |
ATCAATGGCTCAGGCTCATC |
60.189 |
20 |
AGCATGTGCCTTTCGTAACC |
60.14 |
20 |
158 |
27 |
184 |
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