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Simple sequence repeat (SSR)
>UN36441
AAAGAAAAAAAAGAAGCTTATAACAAAGAGGTCTAAATAAGCCAGTCTCTCAAACCCAAGTATATATATAAACATAAAACACAAAAAGAAAAGC
TTATAACGAAGAAGCATATGGTTAAATTACAGAGAAAAATAGTTTAAATTGAGAACAAACTTGGGAAATAACAAACAGGATATTCAAGGGTATT
AGGAAAGGGGTCTAAAACATAGGATTTGGTACGGAGATCATGAATCACCAGTGGTGGACCACGCCTTTTACCAAGCAATAATATGGTCTCGTCT
ACAATCGCTATTGGCAACAGTGCTGGTGGTCGAGAATAAGGAGGTTGGTAGAAATAGGTTTTGGTGAGATCTATCGAACACATTTGCTTCCATG
TCATCATCATCATGTTGCCGCCGCCGCCGCCGAGTGACCATATGACTTGGGTTTGGGTGGGATGGATTTTGAGGGATACACACAAGCGGTTATC
GAGGATGCACAAGACTACAAAGCGAAGGTTAGGTACATGGGAAAAGGGGGCGTTACAGATGACTTGAAAAGTATCCGTGTGAAGATCAAAAGAC
AACGACTTGGTTTCTTCACACTCGGTTAACCAATAAAGCGACCCATCAAAATACACAGGCTTCTGGTCTTCAATAATCCGATACGGAGAAGCAG
GGAGGACGTACCTCCAAGCATTAGTGGTAAAGTCGAAAACTTCACAAGTGGTGGCATTGTCTAGGTCAAACTCAGATGAGTTAAAGAGCCAAAC
CGCCTTGTACGTGCCCCTGACTTTGTCTTTGCCGAATCCTAGGTCAGTTCTCGGGTGTGGCAGCCTCTTTTCAGCGCGCGGGA |
Primers for UN36441 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACGCCTTTTACCAAGCAAT |
60.131 |
20 |
ACCGCTTGTGTGTATCCCTC |
59.997 |
20 |
219 |
248 |
466 |
2 |
CACGCCTTTTACCAAGCAAT |
60.131 |
20 |
ATCCTCGATAACCGCTTGTG |
60.096 |
20 |
229 |
248 |
476 |
3 |
GCTGGTGGTCGAGAATAAGG |
59.694 |
20 |
ACCGCTTGTGTGTATCCCTC |
59.997 |
20 |
163 |
304 |
466 |
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