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Simple sequence repeat (SSR)
>UN36616
GAGCCTACTTTATCTTCTCCGATCTACGGCCTCGAATTTTCACAGATCTCTGACGGTTCCGTCACCAGATTTATCTCATCCGGCAACCTCCGAT
CGCTTTTTAAATCTTTTTATATTCTCTTTAATTTAAAATCATCAGAAAACTCTCTTATTTTATTTTTATCGAGAAAACTTTTTTTTATTAATTT
TTGTCCGTGTCCGCTTATTTTTCTCGACAAGTCATGCGTTTGACGCTTTTCACCTCAGATGAAACGTAATTGACATTTCTGCCCTTTCTTTTCT
ACTTAATCCGATAGCCACGTGGCATCATCTGAAGAAAAGTAATCAAATGAGTCAAAACCACCACCACGCGCACACAGTTCAAACGACGGGCGCG
TCGAGGAAACGCAAGGACACGACTGAGAGTGGTTTAGATGTTGATCCAAGAGCCACTCCGGCTACATCGAACTGGGTCTTGGCCGGCTACATGG
CTCACGAGTTCCTCACGTGCGGAACTATGTTGGGCCGGAAGCTATATCCTGGATGGGCTGGAGTTGGGCCGTTGGACACGCCGTCGACGCAACA
ACAACACAGGGAAGTGAAGAAGAAGAAGAAGACTGACCAGAGCTACTCTGACGTCTCGAGTGTGTTCAAGACAGATGGGATCCATATTCCTGGT
GTGGTTAACCCGACCCAGCTTGCTAAATGGATCCAGATGTAACTATATATATCATCATTGCCATTAGTTATTTCTCTTTTACTTATGGTCGTCT
CTTTTGTATCGTTTATGATCTTTCAACATGTTACTAATAATTTGATAAGTAATTGTTAGTCTTGTGTTCATCGG |
Primers for UN36616 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATATCCTGGATGGGCTGGA |
60.252 |
20 |
TCCATTTAGCAAGCTGGGTC |
60.214 |
20 |
177 |
513 |
689 |
2 |
ATGGCTCACGAGTTCCTCAC |
60.269 |
20 |
TCCATTTAGCAAGCTGGGTC |
60.214 |
20 |
223 |
467 |
689 |
3 |
ACATGGCTCACGAGTTCCTC |
60.269 |
20 |
TCCATTTAGCAAGCTGGGTC |
60.214 |
20 |
225 |
465 |
689 |
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