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Simple sequence repeat (SSR)
>UN03378
AAGAGAAGAAATATAATACTGCAGCTCTCAAGAGAATAACAATTTCCAGTTAAGGAGTATTTAGTAAAACACATGCAATAATCTGGAAAGAAGA
AACACATGCAAACTGACTAAAACTTATAGTAACACGTACAACCAGATTTCTAACTAAACAACACCATTACAACAAAAATGATGCAATGGCCTAG
TTTCATCAATCATAGGCGGCCTCTACAAGCTTGGCAGTAAACCTAAGCTTCTTGATTTTCAACTTTATCTCCTCGGAACATAATGCTTTCCACT
CATTGCTTAACTCTCTTCTTTTTTCCGTTCCAAGGTTCATCATCAGCTTCTTAAGCTGTAACTTCCTCTGCCAAACACTTAAACCTTGAAAAAT
CGTGGTCTAAAACGCATCTTCCACAACGCGTAACTCATCAGCATCATCATGACTCTCCTTTCCGTCGGTTGTTTTGTGAACACCCACTTCACGA
AGCGATTTGCCATCAAACGCACCTTTCTCCGCCCCGTTTTCATTTACAGGTTCATCATTACCCACTCGCCCATCATCCTTTACAGGTTCATCAT
TAGTCACTCGCCCGGTTTCTCTAAAGCCATTCTCGATCTGCACTAGGTTCTCCATGCCATTGCCACCATCAAGCTTACTACTTTCATCCCCATT
GTCATTCACATAAACAGCATTATCCATTTGTTCATCCCCAGTCTCTCCTGGTGATTTCTCAATGCCTCCCCCTTGAGCCTCTTCTTGTTGAGCT
TTCTCAGTAGTGCCTCCTCCGTTAGCAGCAACAACTTCAGGTTGGTAAACGCCCCAGATCATGTTGGAGTATCCAAAGGCTTGAGAGTCAGTAA
GCCTAGTAAAGAGCGGATCTTCCCCTCGATCGATTCTCTCCACGTGAAGAGCGAACTTCCTCCTCAACTTCCTGACCTTACTAAAAAGCTGCTC
CTTGGAGAATTTCACATGGATGGAGCCTTGCACGAAACGGAAGAAACCGTCCCAATCGAAACTTGGATCGTGCCTTGTATTCACTCTGTAATCG
ACTAATCCCTTTAAGATAGAGAGCTCGTCGTCCTCGTTCCATATCCGTTTGATCAAAGGAGAAGCCAATTTCTTCTTCTTCTTCCTCGAAACTT
CCTCTGTGGGAGACTTCTGCAGACAAGTATCGGAGAAATTGAGGCGCTTCGTTGTCTCCATCTGCACTTACCTTACACAACGTTCACATCAAAA
ATCAACTCGATCAAGTGGGATGGGATGGGATGGGATGGGACGGGACGGGAAAAAGACAAAACCTAAGAATCTAGCTTAAAAAA |
Primers for UN03378 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCGTTGTCTCCATCTGCAC |
59.837 |
20 |
AGGTTTTGTCTTTTTCCCGT |
57.697 |
20 |
111 |
1176 |
1286 |
| 2 |
CTCGAAACTTCCTCTGTGGG |
59.837 |
20 |
AGGTTTTGTCTTTTTCCCGT |
57.697 |
20 |
168 |
1119 |
1286 |
| 3 |
CCTCGAAACTTCCTCTGTGG |
59.837 |
20 |
AGGTTTTGTCTTTTTCCCGT |
57.697 |
20 |
169 |
1118 |
1286 |
|
|
