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Simple sequence repeat (SSR)
>UN36834
GGGAGGGAAGGAAAAATGCAAAGCTTGGGAGGGATTAGGAGTTGGCCGGCGACTTGGAGAACCACGACGGCGTCTATGACGACGACGACAACGA
CGACGGAGAGCGTCAGAAAAGTCGCGCAGGTACTAACCGTAGCGGGATCAGATTCCGGCGCCGGAGCAGGAATCCAAGCCGACATAAAAGTATG
CGCGGCTCGTGGCGTCTATTGCGCTTCCGTCATAACCGCCGTCACAGCTCAGAACACTCGTGGCGTTCAATCCGTTCATCTTCTCCCTCCGCAC
TTCGCCTCTGAGCAGCTAAAATCAGTCCTTTCTGACTTCGAAATCGACGTCGTAAGCTCTTCCTTCTTCTTCTGAGTGATTTGACTTGCTCTGT
TTCTCTCTTGCTCTGTTTCTCACTTGCTCTGTTCTCTTATGATGATGATGATGATAACTGTCACAGGTGAAGACTGGGATGCTTCCTTCCCCTG
AAATCGTCCAAGTTCTTCTTCAGAGTCTGTCAGATTATCCTGTCCGTGGTAGAGAAACCGAAACACATATTCGCTTCTTGTTCTGTTTTTTTTT
TAAGATACGAAAGGTTGTGTCTTTCAATAGGTTAATGTAGTTTTTTTCATTAATGCAGCTTTGGTTGATCCTGTGATGGTATCTACAAGTGGCC
ATGTTCTGGCTGGTTCTTCTATCCTCTCCATCTTTCGGC |
Primers for UN36834 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCGTTCAATCCGTTCATCTT |
60.081 |
20 |
ATTTCAGGGGAAGGAAGCAT |
59.903 |
20 |
224 |
251 |
474 |
2 |
GCGTTCAATCCGTTCATCTT |
60.081 |
20 |
GCATCCCAGTCTTCACCTGT |
60.12 |
20 |
208 |
251 |
458 |
3 |
GCGTTCAATCCGTTCATCTT |
60.081 |
20 |
AGGAAGCATCCCAGTCTTCA |
59.803 |
20 |
213 |
251 |
463 |
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