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Simple sequence repeat (SSR)
>UN36924
GCAAAAGTTCCTCGTTATATAATAAGAAGAGGATCAGGAAATGGTTAAAGAGAATTCAGAATTACACCAACCAAATTAACGGGTTTTTCTCATT
TTATTACTCACAACCTTAATGGTGTAAAAATGAAAAACTCAAAAGACGGAGGAACGGTTATTTGTGTCCTCTCCTAATTCCCTCCTTTTTCACC
TGATATTATTATTCCGATGCACCTAAAGAAATCATATGGGCTGCTGCTTGCTTGCTTGCTTGCTTGTTTGAGGGAAAATAAAATCAATAGACGC
GAGCTTTGGGAGGGAAAGTGTCAATCTCATCGTCGAGAGTGTCCATGTGAACAGGCCTATACTCCAACCTCACTTTCTCATCTTCCCAGTACCC
CAATGTGTGCTTCATCCATTCTCCATCCTCCCTTTTCGTGAAATCCTCCCGAGCATGTGCTCCTCTGCTTTCCTTTCGTGCTTCCGCAGAATGC
ATTGTTATGGACGCGTTTATCAAAAGGTTCTCCAGTTCTATTGTCTCTATCAGATCAGAGTTCCATATCAAACTCCGATCTTTAACCTAGACAT
CCTCGAAACTTTCCCATGCCTTGTCGATCAACTGACAACCTTCTTCCAATGTTTCTTGGGTGCGGAAGACAGCTGCATTGTTCTGCATAATCCT
CTGCATGTTCAGCCTGATACTTGAAGTAGGAAGTGAACCGCTTGAGTGTCTTAACTTGTTCAGCCATTCGATCGTCTTCTTACCTGCAGTCTCT
TCTAGAGGTCTCTGTTTCTGACCTGGTTTGCTTATCTCTGCACCCTATTTGCACAAGCACGCCAATACGACATGTCG |
Primers for UN36924 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGAGGAACGGTTATTTGTG |
60.357 |
20 |
TTTCACGAAAAGGGAGGATG |
60.044 |
20 |
279 |
141 |
419 |
| 2 |
CGGAGGAACGGTTATTTGTG |
60.357 |
20 |
TGGGGTACTGGGAAGATGAG |
59.92 |
20 |
238 |
141 |
378 |
| 3 |
CGGAGGAACGGTTATTTGTG |
60.357 |
20 |
TGACACTTTCCCTCCCAAAG |
60.081 |
20 |
165 |
141 |
305 |
|
|
