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Simple sequence repeat (SSR)
>UN03425
AAAACTTGTAACCATCAAACACAAGTTGCAAATAAAAAAAACTGAACAGTTCTGAATTTCCACAACGAAAAACAAAAACAGAACCTTTCTTGAA
TCTAATAAAACAAACAATACTAAGTTATTATTATTATTCAATCACTGAGATTCACATCAGAATCATTGCCCATACCCTCATCTTCACTCTCATG
ACCACCACCACCATCACGACGATGATTCTCTTCTTCCTCCTCATCCTCTTCACGTAGCCTAGCGATCTCAGTCTGAGCTCTCTCCACAATCTGT
TTCTTCTGCAACTCCAAATCTCTCTGAAACTCACCTCTCATCTTCTCCAACTCCTTCATCTGCTCTTTCTTACTCTTCTCCATCTTCTCATAAA
CCTTCCCAAACCTCTCAACCGAATCCGCCAACAGCTTATACGACGCCGCGTCATCGTCCCCTTTCCTCCTCCTCCTCCTCTCATACTCAACCTC
CTCCTCCTCATCATCATCCTCCTCCGAATCGCCAGGACTATCCATCATCTCATCAAACCCATTAGACTTCTCCAAATAAACCTTGGTGTTCATA
AACACAAACTCCCCCGAATCAACCCCGCACGCTAAACCGAACTCCGGTTTAGCCGAAGAACCGCCACCACCAAGCAACATATCCAGCTTGTTGA
AAAACGACCACTTGCTCGAACCCAGACCAGACTTCTCCACCTTGACCCTCTCCTTCTTATACTTCCTCTTCAAGTTATCAACCATTCTCCGACA
CTGCGTCTCGGACCTCTCCGACCGAAGCTCCTCGCTGACTTTCTCCGCGACCTCGTTCCAGTCCTCGTTCCTCAAACTCCTCCGACCAAGCTGC
AAGAACCTGTCTCCCCACACTTCTAATAAGACAAACGCCTCTTGCTCGGCTTTCGCTTCGCTCGGACCGGAGGAGGAGAAGTCGTAACCGGAAG
GAACCGGTTTGGTCGGTTTAAGCCTCTTCTGAAACCGATGACTGTATCCTCCTCCTCCTCCTCCTCCTCCTCCGTCGTCTTCTTGCTCCTCCTC
GTCGTCGTCTTCTTCTTCTTCGTGGTAATACGCGTGGCGTTTGGGGATGGGTCGAGTGTACATAGGATGTGTTTGGCGATTCAGAGGGTAAAAC
TTCTTCGGGTACCCGGTTTCGTCTTCACTGTCACCCATCTAAAGAAGAACGATAGAGAGAGAGAGAGAGAGAGATCTAGGGTTTTGAATTTGAA
ATTAAGGTACCTGATTTTTCACCAACAGAGGAAGATCTTTGAGGGTTTTGGCTAGAGGAGTTGAGAATTGGTAGAAATTGAGGTTGTTAATGGC
AGTCTAGGGGTAGAGAGATCTGCATA |
Primers for UN03425 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGCCAACAGCTTATACGAC |
60.658 |
20 |
GATTCGGAGGAGGATGATGA |
59.971 |
20 |
100 |
401 |
500 |
2 |
CAAACCTCTCAACCGAATCC |
59.526 |
20 |
CGGGGGAGTTTGTGTTTATG |
60.22 |
20 |
198 |
383 |
580 |
3 |
CCAAACCTCTCAACCGAATC |
59.526 |
20 |
CGGGGGAGTTTGTGTTTATG |
60.22 |
20 |
199 |
382 |
580 |
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