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Simple sequence repeat (SSR)
>UN37080
GGCGAGTAAGACAACCGAGATAGGACAGAGGACATGGGGGATCATGAAAGGAGTAATGGCAATTGCTTCGCAAAAAGTTGAAGAGTTCACCAAA
GAAGAAGCATCAACCTGGAACCAACAGAATAAAAACGAGGGCAACGGTTACTACCAGAACAAAGCAGCAACGAATTCATCTTTTGGAGGGTCAC
ATTCATCATCCAGTTATCAAAACAATAACCGTAACTCGAGTACTTGGGATGACTGGGGTGAGGAGAACAATACTAAAAAGGAAGCAGCACCAAA
AGTGTCACAGAGTGGTCACCACAACAGTTATGGTAACTCGAGTTCTTGGGATGACTGGGGCGAAGAGAAGAACAGTACCAAAAAGGAAGCAGCA
CCAAAGGTGTCGACTTCTAATGATGATGATGATGGTTGGGCTGGTTGGGATGACAATGATGGTAAAGATGATGATGATGGCTATTACCAGAGTG
CTGCAGGAGATAAGAAGTCTGTAGGTCACAATGGGAAGTCAGACACTGCTTGGACCGGTGGAGGTTTTCTCTAACGGTGTTTCAGGATAAATGG
TGAATGGAGTTGTACACTTAAGGACAGAGCAAAAGCCTTGTGGTCTTCTTGCTCTGTCCCAAGAGATAGAGCAGAGTGTGTGGTCTTTTCAACC
ATTTTCACATTATCGATTGCTTTGGAGTTACATGAACTAATGATCGTGTCGTTATTTGTTTCTTCTACAATATAGTTTCTTTATATCGTCATTA
TATTTGTACAAGCATTATAGAGGGCTGCTTACTATAAGTTATAGTCTATAACCTATGCAGGTTGGTCTTCAGCTCTTTTTTTTTGATATTCGAA
CCTTTTTTTTTGG |
Primers for UN37080 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATGACTGGGGTGAGGAGAA |
60.048 |
20 |
ATCTCCTGCAGCACTCTGGT |
60.017 |
20 |
246 |
236 |
481 |
2 |
GACTGGGGTGAGGAGAACAA |
60.088 |
20 |
ATCTCCTGCAGCACTCTGGT |
60.017 |
20 |
243 |
239 |
481 |
3 |
AAAAAGGAAGCAGCACCAAA |
59.861 |
20 |
GAGCAAGAAGACCACAAGGC |
59.997 |
20 |
257 |
362 |
618 |
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