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Simple sequence repeat (SSR)
>UN03426
GACACTTGAAAATAAGATTAAATTCATGTATTTCGTTCATTACATTACCCAGACCACAAAACCAAGTCTTTTTTTTTTTGTGTTTGCAGAGTTT
ACAAACCTTTTGTCTTCTATAATCTAATTTGACCCCTTTTTATTTATATTCTTTTTTACTGAGGAGAACAGTGAAAAGGGCACATTCACTACAC
TCTCCAAGACTCACCCCTGCACCATTTTTCATCATCATCAGTAGACAGAAATGTCGACGCTTATACCTCTCATGGAAAGACTTTTCCCAGAGAG
CTTTTGATCCTCGCGCAAGCCCAGCCACATGCACGAGATCCTCGCTAACGCAGTTTGTCCCACCACTTTCACCCGGTACACCATGCTCAGATCT
GCAGCTGCCGCCCATAACTCGTTCCCAGCAGCAACACTCATTGACCTCCTTGAGTCATCATCATCATCATAGCCCTCTACATCCGAGTGGGTCA
CCACCACCACCGACCCATCATCAAACACAACCACATTCCCAGAACAAACCTGCTTCGTACTTCTCGGGATCAAAGCTGAAGTAGCATCAGTAGA
GGAACTCTGGGTGGTATTCAGCACCTGACGTTGTAGTACTCAAGAGCCGCCTTCCATTGGGTGGAAGCTAGTTTCACCCTAGGCCTGATTGACC
TAACGTAGGCATATGCTTCTTCAGGTGTCATGTGCTTGTGTTGAACCAAGTAGCATAAGACGATAGTTGTGCTGCGGC |
Primers for UN03426 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAGTTTGTCCCACCACTTT |
60.012 |
20 |
AGGTGCTGAATACCACCCAG |
59.989 |
20 |
259 |
332 |
590 |
| 2 |
GCAGTTTGTCCCACCACTTT |
60.012 |
20 |
ATCCCGAGAAGTACGAAGCA |
59.836 |
20 |
209 |
332 |
540 |
| 3 |
GCAGTTTGTCCCACCACTTT |
60.012 |
20 |
TGGTTGTGTTTGATGATGGG |
60.216 |
20 |
172 |
332 |
503 |
|
|
