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Simple sequence repeat (SSR)
>UN03436
GGAAAACAGAGTCAGAAATTTCCTCTTTTACGAACAGAGCGAAAATACAAACAAACAGAGATTCGATTCTCTCTTAATTATTATTAACACCAAT
TTTCCTCCTCCTTATCACAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCTGTTTATTATGAAAAGAGGATACTCCCAATCTCCTTCAAGCTCT
ACTCCTCCTCCTTCTTCCAGATTCAAATCAAACCCCGAAGGTGATTCTCAGTTTCTGGAAGATGATTCCACAAAGAACTTTGCACGCAAAGTTG
CTGATCATTACAGTCGAAGAACAAACCAAACTCTGGAAGAGAGAGAAGCTAGTCCCATCATTCATCTCAAGAAACTCAACAATTGGATCAAAAG
TGTGTTGATCCAGCTCTATGCTCGTCCTGACGACGCTGTTCTAGACCTCGCCTGTGGGAAGGGTGGTGATTTGATCAAGTGGGACAAGGCAAGG
ATTGGTTACTATGTTGGAATCGATATAGCTGAAGGCTCGATTGAAGATTGTCGGACGCGTTATAATGGTGACGCAGACCATCACCAACGTCGTA
AGAAGTTCAGCTTTCCCTCCCGTTTATTATGTGGCGATTGTTTTGAGGTAGAACTAGACAAGATTCTTGAAGAGGATGCCCCTTTTGATATCTG
CAGTTGTCAGTTTGCTATGCATTACTCCTGGACAACTGAGGCACGTGCACGACGAGCTTTGGCGAATGTCTCAGCTCTTCTTCGTCCCGGTGGC
GTCTTTATAGGAACAATGCCAGATGCCAATGTTATTA |
Primers for UN03436 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCTTTTACGAACAGAGCGA |
59.64 |
21 |
CGTGCAAAGTTCTTTGTGGA |
59.881 |
20 |
253 |
22 |
274 |
| 2 |
CCTCTTTTACGAACAGAGCGA |
59.64 |
21 |
CGGGGTTTGATTTGAATCTG |
60.301 |
20 |
204 |
22 |
225 |
| 3 |
CCTCTTTTACGAACAGAGCGA |
59.64 |
21 |
GAGAATCACCTTCGGGGTTT |
60.306 |
20 |
216 |
22 |
237 |
|
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