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Simple sequence repeat (SSR)
>UN37858
GGAAACCCTAAATAGCTTCAAAGGCGTTTCCTTTCCGTCATTCATCATCTCTCCGCGCCTCTCTCTCTCTCTCAAACTCTCAGCTCACAGAGAC
GACAATCATCATGGGGAAGAAGAAGTTTGCTGATGAGAGACCTGTGGCTGAAAGCAAGCCGAGAGTTATGCGTCAGATTGATGAGATGTTTGAT
CAGCTTGAGCTTAATGAGTATGGAAGTGAGAGTGAAGACAATGATGGTTACCAAGAGGAAGAAGAAGAAGAAGAGTTCAATGCTCAGAGCGTTG
GTAATGATTTTATTTACGAGAAGCCGAAAGGTTACGAGCTTGATGATGAGAAGTATATGAACCCTGCGGATCTGTTGAAGAACAGTGACAATGT
GAAAGACAAAGAGGAGCTTGAGAACATCATCCGCAGGTCTGTGCAGTACGGTGAGGATTTGGTAAACGGCAACGAAGATGAGTTTGTGGAGGTG
GTTGAAGAGAGCAGCGACGAAAGCGAGAAGTGGGATTGCGAGACCATAGTGACGACGTACTCGAATCTCGATAACCACCCTGGTAGAATCTGTG
ATCCGGAGAGAGCTAGGAAGAAGCTGAGCGAAGCGTTAGCTAAGGCAAAGAGTGTGAATGGGAGTGGTAGTAGAATCATTACCCTCCAAGGCAA
AGAGAAGCTTCCGGTTGAGTTTTTACCCGGTAGGAGAGTTGAGCAAACAACCAGTGTCAAACCGAAAGCTGAACCGGTGAAGAGGAAGGCTCAC
GGGGAAGAGACGAAAGAGGAGAAGAAAGAGAGGAAAGCTGCTGTGAAAACAGAGAAGAGGGAAGCGAGGAAGATGAAGAAAGAGACGAAGGAGC
TTTATAGGTTTGAAACGCAGCGTGCTCAGAAAGCTGTTGCTGTTTCTGGTCCATCTTCTATTCCTCTTTAAGGGTAATACTAAACGTATCTCAG
AGCCCCAGTATTTTTTTTAATATCGTTCATGTAATATTTTGTGTTTTGTTCAAGATTTTGAATCTCTCTTATTTTTGTAAGGACGTCTTTACTT
TTTTTACTAGTCAAGTTTCGAG |
Primers for UN37858 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGATGAGAGACCTGTGGCTG |
59.98 |
20 |
TCAAGCTCGTAACCTTTCGG |
60.378 |
20 |
201 |
125 |
325 |
2 |
TGCTGATGAGAGACCTGTGG |
59.98 |
20 |
TCAAGCTCGTAACCTTTCGG |
60.378 |
20 |
204 |
122 |
325 |
3 |
GCGCCTCTCTCTCTCTCTCA |
60.12 |
20 |
TCAAGCTCGTAACCTTTCGG |
60.378 |
20 |
271 |
55 |
325 |
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