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Simple sequence repeat (SSR)
>UN03460
CTACAAATTATACATTTTTATTTGGTAAGATAATTTCATAACCAGAAAAATATCAATTTATACAAGTTAACTTTGGAAGATATAAAGATTTTGA
AAAGAAAAAAAAAAACTCTCTCTCTCTTCGAACAAGAGCGATCAAAAGAGCGACTTTTCTGGTTTTTTACAACTTCCTCTTTCGCGGTGGCTAC
GGCCGCCGCTTTTGCTTTATATTTTCTGTTTTGTTTCGTGTCTTAGTCTAGATCGAGTCAATAAGTATGATTTCGTTGAAATCATTGTCGTCCG
CTTGGTATCAAATCAAGCGATGTGTATTATCGTCACCATGTCTCTCCGTTTCATGTAGCCTTCGTGTGATGTCGTCATGGGAAAACAGGTTCCT
GTGTATCCATTGGTTCATTAGGCGGTTATGGAGTTTGAATCAAATCTGTGATGAATGTATTTTCTCCCTAATTGGTGAGGCTATTTTCTCCATA
GTTGTTGAGTGTGATCTTCGGGCAAACAAAACGTGGCGGTTCTGCGTTGTCGACGTGTTTCTGTGGCTTGCTACGCACAGCGTTTTAATCTTTT
CCAAGAATTTCTTGAGAAGAATGCAAGTTCTGTGGAACAAGAAAAGAAATCTTAAACCGTCGTGGATATGGGGAAGATTGCAGACATCGTGTTC
TTTTACCATCGTGATGAAGGCAACAGAGGTATTTACTTTCATCAAGA |
Primers for UN03460 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGTAAGATAATTTCATAACCAGAAAA |
58.612 |
27 |
GATACCAAGCGGACGACAAT |
59.962 |
20 |
269 |
23 |
291 |
2 |
TTGGTAAGATAATTTCATAACCAGAAA |
58.612 |
27 |
GATACCAAGCGGACGACAAT |
59.962 |
20 |
270 |
22 |
291 |
3 |
TGGTAAGATAATTTCATAACCAGAAA |
57.477 |
26 |
GATACCAAGCGGACGACAAT |
59.962 |
20 |
269 |
23 |
291 |
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