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Simple sequence repeat (SSR)
>UN03466
CGGAAATATGTCAATAAGAAGAACCATATTCGTAAAATAGTTAATTCGTCAATTGCACTGCGTCGGGACTACTTATTCATGTGGAAAGTAAATC
CACGGATCCTGCCGTAGAATTCAACAAATGAGAGAGAATAGAAGAATGGTACGGAGACTCGTCTCATGTTTGTGTGTGTGTGTGTTCTCTCAAG
GTTTGAGAGCAAGTGAAAGACCAAACCTTGGATGCTTGTCTAAGGCCCTAGTGTCGATCTCACTGGAAACAGTCACTAGAGATTTGGGCAAGAC
CTCGTGCTGAAGAAGAGCACCGAGTGTGCCACGGCTGTTGAAGTTAGCTTTCACTGAAGTCAAGGGATCAAACGCGTATGACCCACCAACAGTT
ATCGTGTTCTCATTAGTCGAAGGGAGGATCTCAGTGAAAGTGACAGTTGTCAAAATAGTAGAATCAGTGTCGACTTTGACATCGAAGACAGCAT
TCTTGTATTTGTATTGAGTGGCAACATCAGCAGCATGCACGCCTCCTTTCTTGAGAGCAGTAGACGTAAGGGCCACGCCGGAGGCACTGTAAGT
GGAGATACTGAACTTGTGATCGGAGGTGTAGTCTCTCGTCAACAGATCTTTGGCTTTTTTGCCGATATCCGAGAACATTCCTGGACCTTTGCTC
ATGGTTGATCCGCGATTTTGTGAGAGAGAGAGATCAGCCAAGTTTTGGAGGAGGAGGAGAGGCTGTGGAGAGATAGATAAGAACAAATACAGAC
TTGAACTTTTTTTTTCTACG |
Primers for UN03466 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCAGTAGACGTAAGGGCCA |
59.898 |
20 |
TCTCTCCACAGCCTCTCCTC |
59.663 |
20 |
206 |
526 |
731 |
| 2 |
GCAGTAGACGTAAGGGCCAC |
59.763 |
20 |
TCTCTCCACAGCCTCTCCTC |
59.663 |
20 |
205 |
527 |
731 |
| 3 |
ATTGAGTGGCAACATCAGCA |
60.272 |
20 |
TCTCTCCACAGCCTCTCCTC |
59.663 |
20 |
249 |
483 |
731 |
|
|
