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Simple sequence repeat (SSR)
>UN38100
GGAAGGATAATTCAATCATTAAACTTCCTCTCTATAAAATTTCCGTTGAAGAAGAAATCGAGAAAATTACATGGAAGAAGATAGGAGAAGTAGG
GGGCATCCTCTGTTGAGATCGAAGAAGAGACAAGGAGGAGGAGGAGGCTATAGCCATGGCTTCTCACAATCTCAGATTCAGTCTCTCGCCGTCA
TCTGTCAAACACTCCTCCCTCCTCCTCCTGAGACCAGGGCGGAGCAAGAAGCTGTTGATACCTTCGACGTAGCCTCCCGTTCTAAGCCACCTTT
CACCGATGAGGTAGCGGAGATGATAGCAAAGCCATGGAAGAGTTTCTAGACAGCGTTGATGCGGTTGGTGGTGTCAGCACAAAGGGTGAGCACT
GGACGACGTACTTCTCGGCTCACCAGATGGGTAGTTGCAGGATGGGACTCACGGCGGAGGAAGGTGCGGTGGATGAGAAGGGTGAGAGCTGGGA
AGCAGAGGGACTGTTTGTTTGTGATGGGAGTGTGTTGCCATCAGCTGTTGGAGTGAATCCAATGATCACCATCCAGTCTACTGCTTACTGCATC
TCCACAAGGATAGTTGCATCACTGACAGAAGGCAATAACTGAAACTATCTCATCATGTTCCTGAAAGATTTTGGATTCATACTGAATAAGTGAG
TGTTCCTTGCAAGAAAAGATTCTGGTGTGTTATACACGTTTCTGCAATGGTACGTACTAGTTACAGTTTCTTGAAGAATTTCAAAATTATTAAT
GACAAATTCG |
Primers for UN38100 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGAAGTAGGGGGCATCCTC |
60.037 |
20 |
ACAGATGACGGCGAGAGACT |
60.017 |
20 |
109 |
85 |
193 |
2 |
AGTAGGGGGCATCCTCTGTT |
59.957 |
20 |
ACAGATGACGGCGAGAGACT |
60.017 |
20 |
105 |
89 |
193 |
3 |
AAGTAGGGGGCATCCTCTGT |
59.957 |
20 |
ACAGATGACGGCGAGAGACT |
60.017 |
20 |
106 |
88 |
193 |
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