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Simple sequence repeat (SSR)
>UN38143
CTCGCCTTTAATATACAGTTTACCATTACGATGTTGACAAGAAAAGAAGCAACTATGGGACTGGTGAAGGAGATGTTGTGGCTCGAAGGAGTTG
CTGCAAAAACCTAGCTGCTAGACGTTGCCCTACACCTCCTGCAACACGTCCTCCTAGTCTTCTTGCTTCCGGTTGTTGCTAGTTTCCCGTCGAT
AAGGGCGAGGACGTCGGTGGTGATGAAGTCCACGTACTTGTTGATGAGTTTCCCAACTCCTCTGATGAGGTAGAAGTCAAGACCAATGGCTTCT
TCGATCCCGGGGCGTTGGACTTTGACAGCAACAACCTGACCCGAGTACCTCAGGTGGGCTTTGTAAACCTGGCCAAAACTGGCTGCTGCGATTG
GGTCGGGGGATATGTTGGAAAAAATGGATTCTAAAGACAAATCCAACTCTCTTTCGATGCAAGCAAAGGCCTCTGCATCAGGGAAGGTTGGCAA
AGCATCCTGAAGCTCAGCAAGCTCTTCGAGGTAATCGGGAGGACAGAGGTCGGGTCGGGTGGATAAACCTTGACCCAACTTAACAAAAGTGGGC
CCCAGACGAGTGAAGATCCTTCGGAGCTAACCGGCTCTCTTCTTCATGTTCAGCTCTAGCTTCCCTTTCCTTTGATCAATCCCAAGCTTCAGAG
CGAAGCCACCCAAAGCTGTCAATATCTCCACACTTCTCCGCAAAGCCTTGAGAGGCTGAGAGCCATGTTTCCTGGCGATAAGCTCCGGGGAATA
AACAGAAGCGTCGACAGCACGACCAAGAGCACGCCCCTCCGCTTGAAGATCATCCGCGAGATCAGCACGTTTGTATTGTACAACAGGCGCAGGG
GTTGGTCTTGACGAGGATGAGGGAGGACTTGGGGCAGCTCCATCTTCCCCCCTGGGCCTAGCTTGAACAAGAGCTGCACAAGCTAGTCTCCTCC
GATTCACAAAGAGAAACTTAGACTTTACACCTCGTCTTCTTGAATTGTCATCACCGAATAGAGTTAAACCCAGCGACTGGCCAAACACAAGACT
CGTCATCGTTGTAAAACCAGAGAGAGAGAGAAGGAAGAAAGAATTTAAGATTGCTCCTCAGCCAGTAACGGCCATCCC |
Primers for UN38143 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGAGGATGAGGGAGGACTT |
60.073 |
20 |
ACTGGCTGAGGAGCAATCTT |
59.043 |
20 |
244 |
857 |
1100 |
2 |
ACGAGGATGAGGGAGGACTT |
60.073 |
20 |
TGGCTGAGGAGCAATCTTAAA |
59.967 |
21 |
242 |
857 |
1098 |
3 |
GTCTTGACGAGGATGAGGGA |
60.199 |
20 |
ACTGGCTGAGGAGCAATCTT |
59.043 |
20 |
250 |
851 |
1100 |
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