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Simple sequence repeat (SSR)
>UN03489
AGACACAGAAGATCCATAGAATAAACAGAGGTTCCAAACAGTTTTTATATATGTTTTTTTGGGGGTACAAAACAAACACTTTCGAGGGTGATAC
GTATAAAAGAAAAAAAAAGTTTTTAAAACATTAATAAATTGTCATAAAAATACAAAAACAAAAACTCAAGGAAGAGAATCATTAAATAGAAATT
ATAATAAGAGAATCATTAAATAGAAATTATAATAATACTCTACATACTTCATCACCCCCTTTTATTTCAGGAATTTAAAAGAGACACTCTCTAT
GAGAAAGAGACTCATAAGACAACGATAAAGCTCCAGGTGTGCCTTGTACCATTCCCCCCAACAGCAAAACCCAAACACACAGCTTTATTTACAA
ACTAGGCAACCCATCACTCACTTCAGAAGACACCACCATCCAGCATGGAGTTGATATCATCTAAGCTCCACAGGTCCATTGGGTTTGCCTCTTC
CTGAGTCATAGTAGCAGCATCTGCGCCAAGCATAGCTTCCACTTCCAACGGAGACTCCCACAAGGCGTTGTTCAGGTATGCCATCAGATCATCA
GAACCATCATTGTTGCTTATCCCTTCCTCAGAGTTGGTTTTGAGCTTCTTGGCTGCGTTGGTTTCTTCAATGAAAGGAGCTTGGTTGTTGTTGA
CTAGCATTGAAGAGATCTCAGGTGTCTTGGGGCCTTGATCACTCCACCCAAACTCAGAGCAGTCCAAGGAGTTACTGCCCTGATCAGAACTGAA
ATACTGGTATCCATTGTTACCTCCAACATCAAAGAACTGATTGTTGAACACCTGAGGCTTCGGTTCCGTGAAACTGTAAATAATTAGCTTCTTT
GAGGTTCTCTTTCGAAATATTTTTTTCTCTCTCTCTCTCTCTTTGTGGTTTGTTGATGCTGTCCAGCC |
Primers for UN03489 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCACCCAAACTCAGAGCAGT |
60.298 |
20 |
GCTGGACAGCATCAACAAAC |
59.297 |
20 |
212 |
702 |
913 |
| 2 |
CCACCCAAACTCAGAGCAGT |
60.298 |
20 |
CTGGACAGCATCAACAAACC |
59.139 |
20 |
211 |
702 |
912 |
| 3 |
TGCCCTGATCAGAACTGAAA |
59.369 |
20 |
GCTGGACAGCATCAACAAAC |
59.297 |
20 |
180 |
734 |
913 |
|
|
