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Simple sequence repeat (SSR)
>UN38311
ACAAAAATTATTCATAATCCTTTTAATCTAAGCAGAGAGCCAAATTTATGCATACATAATAAGATTGATATAACATATATATATATGAGAGCTT
AATATCTCTTGGCTACGATGTACGAGAATCTCCAATAAATTTTGTGCTCCTAGCAATTCGTTAGCCTCTCAACTCCTAGTAGTAATGATATGAC
AAAACCCGAGGATCCAATCGACAAATCTCATACCATTTCAGCAGTTATATCATCAGGAGGAAAACAGAGATAGAGATGACTAATGATGCCACAT
AGCACGAAGCTGCCTTTGAGGATGAATCTGACTTTAGGCTGTTGAATCCAATATCATATGAAATGGTTCCATCAGGCTTAAAAAGTCCAAAGTG
GGTCTCAGAACTTTTCCCCGGTTTAGAATTTTCATTGAACAAAGCAAAGATGTATGCTTTGAGCACCGTTTTGGGTCTAAGAGGTGTCCCTTTC
TTCTTCGCAAGCCTCTTCCTGAGGTTATAGTTATAGGTCCTCGCGTTCTCAGGGGTCGCAGCTGGTTCATCTGAACCTCCTTTAGAAGCCCACC
CTGTCTCAGTAATCATGACCTCCATCTCCTTGAACCCAGCATCTTCCAGCGCCATGTAAGCAGCATCAATCTGAGCATCAAGCATGTTATCATA
ACGTAGATTGGTTTTCGCGTCGTAGATCCCTTCGGTTGGCTTGAAAAGCGCATAGTTGATATCGATCTGC |
Primers for UN38311 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTTTAATCTAAGCAGAGAGCCA |
60.373 |
24 |
AAGGCAGCTTCGTGCTATGT |
60.044 |
20 |
280 |
19 |
298 |
| 2 |
CCTTTTAATCTAAGCAGAGAGCCA |
60.373 |
24 |
TCGTGCTATGTGGCATCATT |
60.104 |
20 |
271 |
19 |
289 |
| 3 |
CCTTTTAATCTAAGCAGAGAGCCA |
60.373 |
24 |
ATTTGTCGATTGGATCCTCG |
59.894 |
20 |
196 |
19 |
214 |
|
|
