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Simple sequence repeat (SSR)
>UN38431
GGATCTTTCCCAAAAGGACAACAATTCTTCTCTCTATCTCTCTCTCTCTTTCTCTTTCACGAAAGAGAGAGAACCCAGAAAAAAATACAAAAAG
AAAAAGCAACAAGAAGAATCGAATCTATCTCTGTTAGTTTTCAAAAGGCAAAATGTTTGATGGTCTGTTTAAACCCAAATTCTACACGAAATGC
AAGTACTTGGTCAAGATAACGAAAACAAGAGTGGAGACGGTGAAGAGAAAGAAAAACTCTGTTTGCAAATATTTGAAGAAGGGCATTGTCGATC
TTCTCAACAACAGCCTCGATTACAATGCATACGGCAGGGCAGAAGGACTTATTGAGGAGAAAAGGAGGTTGTCCTGTTATGAGTTGTTGGAGCA
ATTCTGCGTATGTGTTGCATCCAATGTTTCTCTCTTACAGAGATCCAGTAAATGCCCTGAGGAGTGTCGGGAGGCCATCTCTTCCCTTGTATAT
GCGGCCGCTAGAGTCTCTGAAGTGCCTGAGCTTCGCGATCTCAGGTCTATGTTTGCTGACAGATACGGGAGTAATTCACTTGAACAGTTTGTGA
ACCCTGAGTTTGTGGAGAGCTTCAAAGCAGCGCCTCCGTCAAAGGAAATGAAGGTAACGCTTCTCCATGAGATTGCCATAGAATACTCCATCAA
GTGGGACGCCAAGTCTTTAGAGCAGAGGCTCTACACACCACCTGCTGCTGCTGCTGCTGAAGAGCCGCAAAAACAAAAAA |
Primers for UN38431 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTTCCCAAAAGGACAACAA |
59.573 |
21 |
GATCGACAATGCCCTTCTTC |
59.635 |
20 |
279 |
4 |
282 |
2 |
TCTTTCCCAAAAGGACAACAA |
59.573 |
21 |
ATCGACAATGCCCTTCTTCA |
60.603 |
20 |
278 |
4 |
281 |
3 |
GGATCTTTCCCAAAAGGACA |
58.956 |
20 |
TCTTTCTCTTCACCGTCTCCA |
59.974 |
21 |
240 |
1 |
240 |
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