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Simple sequence repeat (SSR)
>UN38584
GATGAGAGAACACATGAGAGAAATGGAGATTCCAGTTTTATGAATTACTATATACAAAGCAAAGCAAAAGCAACAAAAGACTAGACAGCATGCA
ACAAAGGTGGTGGATTTTGAGCATTGAGGAGGAGTTGAATGGGTTTGATCTGAAGTGCAGGACTGATGGTAAGCAAAGCAATGAAGCAATCCAC
AGGAACTCTAGTTCCCCACAAGTTGAGAGATTCTAGTTTTCTGCATTTGTTGACAAGAGCAAGAAGGCCTCTCTCTGTCACATGGCGGCAACAC
CACATGCTGATTGTCTTGAGATGATGGCAGCGTTCTGCAATGGCGAAAAGGGACTCGTCGGTGATGAATGTTCCTCCAATGTTTAGATGCTGCA
AGGAAGACGTTCTTGATACCAGTTGAACAACGCCAGAATCAGTAATGGCGGTCATGCCCCATAAAGAGATTGAGGTTAAATTGGCTACACATCT
AGCGGAAGCTATTTGGTAAAGACCATTATCAGTTACATGACAACCCCATCTGCTTCTAGATATGTCGAGTTCTCTGAGATTGTAAGCAAGATGT
ACAAGGCGAGAAGTGGAAGCATCGTCCATTTTCCAACCAGCAAAGCTCAGAGACTCTCTTCTCGCCATTGATTGGTTCACAGCTTTTCTCCATT
TCTTACAAACCCCACTTGCCCTATAAAAAACCTCATCAAAAACTTCAATTTTGTTTCCTTTAATGGAAGAACAAAATAAAAATGAAAACACTTA
CTGGGCCAATTCGGTGAAAGAGGTAACCAGAGAAAATATATAAGCAAGAAGGTGTAAAGGTAACCGATCGATCGCTGCTTCTTCATCCATGTCT
TCTAGTAAGAACTAAGAACTTGTTGAATGAGAGATTAGTTGCAGAAAGTTTTTAAAATATATAAATATTCACAAAGAGAAGATTGTATCTATGC
AATTCTCCTCAATAGTTCTTCTTCATAATTACAAGAGGAAGAAGAAGAAGAAAATGTTGTCATTTTCTTAGTTTAATGTACAGAAGATGTGGTC
ATCGTTCCGTCATACTTTTGAATCCCTCCTTCC |
Primers for UN38584 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCGATCGCTGCTTCTTCAT |
59.946 |
20 |
ACGGAACGATGACCACATCT |
60.395 |
20 |
226 |
819 |
1044 |
2 |
ATCGCTGCTTCTTCATCCAT |
59.803 |
20 |
ACGGAACGATGACCACATCT |
60.395 |
20 |
222 |
823 |
1044 |
3 |
ATCGATCGCTGCTTCTTCAT |
59.946 |
20 |
TATGACGGAACGATGACCAC |
59.374 |
20 |
230 |
819 |
1048 |
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