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Simple sequence repeat (SSR)
>UN38645
GGGAAATTGAGAGGCCCCCTAGATGGTAAGGGTCAGAGAAAGGGTGAAATTGTTAAAGAAAAAAGAAAGGGTGGAAATAGAAGAGAGAGTAAAA
TCTTAGGGCGAGAGGAGAAAAAAAGAAGGAGAAAAGGGAAGAGAGATAGAGAGAGAGAGAGAGAGGGAGTGGAGGAAGCGGTTGGCTGGCTTGG
TCGTCCCGCAACTGGAACAAGGGACAAGGGACATGAGTTGAGAGAGTCAGTTGGTCGGACGCCAAAGACTTAAAAATTGAAACTCGTACGGGTT
CAATAATCGATTTCGCTAAGCGAAAAAGCCTAATAAGAAGATCTGGGAGGATTCGGAGATGAATAGCGGCATAATTTTCCGGTGGGGAGATGTA
ACTGTGTATGAGGGAGGAGCTTGGGCCACCGCAATTTCGATTCTCTTAATATTTCTCTTTCGTATCTTGTTCAAGTTTCGCTTCTTTTCTTCTC
CTTCTCCTTCTCCCTCTCCATCCATTGCCGACTCTGTTTCCCATCCCCAAATCCAATCAACAAGAACACGTAGAGTTGTTTGTGATTAAGATTT
GAAATGGCTGATCCAAAACTTGGAGGGAAGCACAGAGGCGTGGGAACATGTTATCCACAAATCCAACCCTCGCCTTTCTTACTCTGCTAGACGC
TGCAAGCCAGACGATGGTGGTCCTATGAAGTACCTAAGTGTGACTGTATTTGAGGATTGCTCCCCTGACATGTTGAAGGACTTCTACATGGACA
ACGATTTTAGGAAGCAATGGGATAAGACTGTCGTTGCTCATCACCAACTTCAGGTTGATAGCCATACCGGAATTGAGATCGGTCGCACTATCAA
AAATTTCCCCTTGTTGACATCAAGGGAGTACGTCCTTGCCTGGAAGTTGTGGTAGGGAAACAAGGACAACTTCTACTGTTTCACT |
Primers for UN38645 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAATTGAGAGGCCCCCTAGA |
60.032 |
20 |
CATGTCCCTTGTCCCTTGTT |
59.82 |
20 |
220 |
4 |
223 |
2 |
GAGGCCCCCTAGATGGTAAG |
59.919 |
20 |
CATGTCCCTTGTCCCTTGTT |
59.82 |
20 |
213 |
11 |
223 |
3 |
AGAGGCCCCCTAGATGGTAA |
59.919 |
20 |
CATGTCCCTTGTCCCTTGTT |
59.82 |
20 |
214 |
10 |
223 |
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