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Simple sequence repeat (SSR)
>UN38690
GGGGGGCTTGGCAAAATCTCCAATCCTCGACGAATCACGCGATCGACTGATTCCTCCTCCTCCTCCTCCTCCTCCTTGGCATCAATTCGCTCAA
AGGGCCAGGGTGTTCTGTCATATTAGACGAAAGGAAGGAAGAAATGGAGGAGTTTGTGGACCATTACTTAGTTCTAGGGCTACCCTCTGGAGAA
GAAGCTCAGAATCTTAGCGAGAAGGAGATTTCAAAAGCATACAGGGTGAAAGCTTTGGACTTGCATCCGGACAAACGCCGAGACGACCCCGATG
CTCACGAGAAATTCCAGAGGCTCAAGACCTCTTACGAGGTTCTCAAAGACGAGAAAGCTCGGAAGCTCTTTGACGATCTTCTTAGGATCCAGCG
CGAGAAACAGCACAAGAAGTCGCAGGTGGATTCCAAGAGGCGCAAGATGATGTCTGACCTTGAGGAAAGGGAGCGTTCTGGTTTTGCACCTAGT
CGTGCGTCTGCTAGACCTTGTGATGAAGAGGAGAGAATCGCGAGGAAGCTTAAGGAGGAGGTGGATAGGATACGTGCGCAACATGCCAAGAAGA
GAGGCGGTTTTGGAACTCCTCCTGAGAGTGGTGGTGGTGGTGGAGATGGAAAGAGAAGAGAAGAAGATAGAAGTGGAGGTGGAGGAGCTAGTGT
CCAGCTTGATAAAGAGAGAGTGTTGAAGGTTTCTTGGGAAACGGTTGGTGAAGGGTATAGCGCGGGAAGGCTCAGAGAAGTGTTTTCAGAGTTT
GGTGAGGTTGAAGATGTTGTTATCAGGAGTACCAAGAAGAAAGGCTCCTCCGCTCTCATTGTCATGGCTACTAAAGATGGAGCTGTAGCAGCGA
CGAGAACATTGTGTGGTGATCTCTCTAACCCATTGCTAGTTGTACCTCTTCAAAAAGCAGCACAAACCGATTTTCCGACCGCAAAGAAATCTGC
AGAAGCAGAACCGCAGAGTAACATAGTTGGTGCTGGTTACCAAGCCTATGAAGACCAGGTCATGGAAAGACTGAAAAAGGCGGCTATGAACCAG
AAACGATAAAAGGAGTATAATGAAGCCTAGGCGTAATGAAGCCACATGATGTCAAGAACTAAAAGCTTTTTCAAGACCAAAGTGGACGTCTCCA
TTTCCATATCACAGACTTTCGTGATCCTTGCATGTTCTTTTTTTCTTGTAATGATATATAGAGTTCAACAAGTTAAGTATTTGTGGAAGTCATA
TGACTCAAATCAATGATTGTTATAGAATCTATAATTCTAC |
Primers for UN38690 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGCAAAATCTCCAATCCTC |
60.014 |
20 |
CAAGTCCAAAGCTTTCACCC |
59.711 |
20 |
243 |
9 |
251 |
2 |
TGGCAAAATCTCCAATCCTC |
60.014 |
20 |
TGAGCTTCTTCTCCAGAGGG |
59.673 |
20 |
188 |
9 |
196 |
3 |
TGGCAAAATCTCCAATCCTC |
60.014 |
20 |
ATGGTCCACAAACTCCTCCA |
60.363 |
20 |
150 |
9 |
158 |
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