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Simple sequence repeat (SSR)
>UN38994
GGGCTTTGTAGCTGTTGTAAAAAAGATCACGATCGCAACTTGTGTGAGAGATATTGAGAGATTCAGATATGGCTTGGTTAGCTAGATCCATCGC
GAACTCACTCAAGCTCGACGAGGACGACGACGATGTTGAGAAGCCACGGCCTAGCGGTGAGTCATCCGTTCAGAATCGATCGGTGTCGGAGTCA
CAGTCTCCTCGAGGAGTTAAGGAAGACATCTCGGAGCTAACCAAGACCTTGAGAAGCCAATTCTGGGGCGTAGCTTCGTTCCTCTCGCAACCGT
CTCCATCTCCGGATCTCCAGGAGGAGAGGAATCATCAGAGTCCAGATCATTCGGAGGAGGAGGACGAGGATCTGATCGCCGGGATTAGGAACGA
TTTCGCGGAGATCGGAGGGAGGTTCAGGACTGGGATTTCGAAGCTCTCCGAGAACTTAGCGTCCAATTTCTTACAGTTGGGCTCGGAAGGAGTG
GATCCGAAGGGTTATGATGACGTAATCGGAGTGACCGATGAGGTAGTTGCGTTTGTGAGGGATCTCGCGATGAATCCTGATACTTGGTTGGATC
TTCCTTTACCTGATGATGATGATACCTTTGATGAGTTTGAAATGAGTGATGATCAGCACGAGCATGCTGTGGCTGTTGAAAGGCTTGTACCGAG
CCTTGCTTCTTTGAGGATTGAGCTTTGCCCTGAGTACATGAGTGAGAATTGCTTCTGGATGATTTACTTTGTGCTTTTGCATCCTAAACTCACC
CAACACGATGCCTTACTTCTCTCCACTCCTCAGGTACTCGAAGCAAGAGCAATGTTATCTCACGAGTTACACAAATCAAACAGAGCACCTGTGG
AAGCAGCAGAGAGTTCTGGAGCTAATGCTGCAGTGGTTGAACCTCTTGCCGTGCCTTATAACCCTTCGCAGGAGTCGTTAGTTGCTAAAACCGT
GAATCCACAGGAGATTGAGACAGACAAGCACCCAATTGAGAGCAAGGAGGAGATACAAGTCGTTGACAAATCTGTCATTGAAGAAAGAAACTCG
TCGACTGATTCTTCTTCTTCGTCTAGATTTGTCTATGTGCAAGCTGAGGACGTAGAAGAAGAAGAAGACGCAGATGATTGGTTGAACGATGAAG
AGAGTTCAGATGCGGTGAGCGGCATGGAAGGAGGAGTAACTACCAACATCCTATTGGTGAAGACGAAGAAGATGTGTCATTCAGTGATCTAGAA
GATGATGATGACGAGGAAAGAGACGTACCCGTGAGTTCTAAGAGATCTACCAACTCTAGTTCACCAGACTGGGTACAGATATAAGACAGCAACG
CAGGTCAGGTAAAAAGAGAACAAAAGAATCAAACCATTGTCTTGATGTCGAGGAAATGTAATACAAATGACCACCTCTAGTGTTCTTTTGGTTA
TATAAACATAAAATCTCTCAAGTCTATCAAAAATCTGTTCGATGAAAACTCATACGAGGGCTTTATTAGAAACTCCAAAATGTTTGTATATAAG
GCAGAATTGGTTTATCATTGAGATTGCAAATTAATAAGAAATTGATCTTTAGATC |
Primers for UN38994 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAACCGTGAATCCACAGGAG |
59.966 |
20 |
GCTCACCGCATCTGAACTCT |
60.564 |
20 |
215 |
934 |
1148 |
| 2 |
GTGCCTTATAACCCTTCGCA |
60.096 |
20 |
GCTCACCGCATCTGAACTCT |
60.564 |
20 |
252 |
897 |
1148 |
| 3 |
TCTTGCCGTGCCTTATAACC |
60.096 |
20 |
GCTCACCGCATCTGAACTCT |
60.564 |
20 |
259 |
890 |
1148 |
|
|
