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Simple sequence repeat (SSR)
>UN03549
TCCAACGGATCCGCCATGACAGCTCGCAAGAGAGCTTCTCCAGTTACTAATTCCGAGAATCAACCGCCGCCGCCGCCGCAGAAGGAGACGGCCA
CCATTGCTTCCGCAGAAGATTTCCGTCTCGCAGCGCCGAAACTGAGCGTGATCTTGGTGATCTCTTCGCTCCTCTGTTCGCTCTACCTCTACCT
TTTCTGTTTCCACTACAATGTCGACAGTGAGCTCAAGCGTCCGATCCTCATCTACGCGGGGCTTAGCTTGGTGGGTTTCTTCGTTACGCTCAAG
CTCATTCCCGTGGCTGCTAGATACGTTCTGAGGCGTAACATGTTTGGTTTCGATATCAATAAACGTGGCACTCCTGAAGGAGATGTTAAAGTGC
CTGAGTCATTGGGAATTGTTGTGGGTATCGTCTTCTTGATTGTGGCGATAATATTTCAGTTCTTTAACTTCACTGAAGACTCGTTGTGGCTTGT
GGAGTACAATGCAGCACTGGCATCTATCTGCTTCATGATCTTGCTTGGATTTGTAGATGACGTCCTTGATGTGCCTTGGAGAGTGAAACTTCTC
TTACCATCCTTTGCAACACTTCCACTACTAATGGCTTATGCTGGACATACAACTATCGTCATACCAAAACCTCTTGTTTCCTATGTTGGCTTGG
AGATACTTGATCTAGGACGGATATATAAGTTATATATGGCGTTATTGGCTGTCTTTTGCACTAACTCTATAACATCCACGCTGGTCTGATGGCC
TTGAGATCGGTCAACCGTAGTATGCAGCTGCTATT |
Primers for UN03549 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCAAGAGAGCTTCTCCAGT |
59.891 |
20 |
GGAGCGAAGAGATCACCAAG |
59.95 |
20 |
142 |
25 |
166 |
| 2 |
CGCAAGAGAGCTTCTCCAGT |
59.891 |
20 |
AGGAGCGAAGAGATCACCAA |
59.95 |
20 |
143 |
25 |
167 |
| 3 |
CGCAAGAGAGCTTCTCCAGT |
59.891 |
20 |
TAGATGAGGATCGGACGCTT |
59.797 |
20 |
218 |
25 |
242 |
|
|
