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Simple sequence repeat (SSR)
>UN39080
TGAAAGAACTATAAAAGTGAGTGATATGTTTGGCTCACATTGGGAAACAAACTTATTTCATTGCCCATGTTAACCTGTTCAAGAAGACCAGAAC
ATCAGTCGGTTAGTGGGGCCAGCTAATATAATTAATTACTTATGGATTTATCCTAACAAAAACGTTATGTCATTTGGATGCGTTCTACCAGTCG
TCGAGATTCCTGATTTCGATTTCCAGAGAACTGAGACGAGCCAAAATGATGAAAATAATGATTTACTATGATGAACATGGACTACATCGATATT
TTTTATATTTTGCTCAAAGAATACTCATATTCATATAGTAATATTAGTTAGATTTCTTTTATTGGTTACTTTGACATTTTGCAGTGAAATAGGT
ATTATGTATATTTCAATCTATGTATGTTAAACAAATGAGCTCTAGAAACAAGAAAAATGACACTCTTTTGTTTTCATTGATGACTAGTATAGGA
TTCACAAGGTAAAAAAACACACGTAGATCCTACGTAACACGAACCAAGCGGCGCCGTATAGCATATGTTAGCACACACTAAAATCCTCGTCCGT
GTTAGCTTAATGACTTACTACTAATTACAACGTCAAGCAAGCTCCCGATTTATCGTTTCCCTATTTAATTATACAAATCCGATTCATCTTTTTT
TCTTAAATTCAAATTAACGCGGGTTAACTCGGTCACCGAGTGAACTCGCTACCAGCACTGATCTGTTTCCCAGTTCCGGCCAACGTAACCGCCC
ATCCCCGAGTTACCGACGGTCAAAGGCCTGCTCCGGCGAAGCATCCTCCGATCGTATACAGATCGTTTCTCGGGATCAGAAAGCGTACAGTAAG
CCGCGTGGATCTTCATGAACTCATCGGCGGACGACGCAGAAGAAGAAGAAGAAGAACTCGTCCGATCGGTTCCCGCCGCCACGTCTGGATGGCA
GATCCTGGCCAGTCTCCGGTAAGCCGATTTGATATCCTGGCTCGTCGCGCCGAGAGGAACCTCCAGGATCTCGTAGAGAGAAGCGTTCGTCGTC
GTCAATCGCAGCGGGATCTGGTGCAGCCGCGGGGCGTCCTCCGTGCAGGTGTATGAGCAAGAGGCGGAGACGAGAGGAGGCGAGATGCGGGCGG
AGCGAGAGGGTGGAGATACGGGGGAGAGAGGGGGAGAAGTGGAGAGGAATGGATTAGCGAAGGAGGTTGGAGAAGAAGAAAGCATATTTTGCTG
TGAAAACGATGTCGTTTGCGTAGTTCTGATTGATTTTTC |
Primers for UN39080 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATCGTTTCTCGGGATCAGA |
60.158 |
20 |
AAATCGGCTTACCGGAGACT |
60.096 |
20 |
158 |
813 |
970 |
2 |
CAGCACTGATCTGTTTCCCA |
59.831 |
20 |
AAATCGGCTTACCGGAGACT |
60.096 |
20 |
260 |
711 |
970 |
3 |
CGTTTCTCGGGATCAGAAAG |
59.807 |
20 |
AAATCGGCTTACCGGAGACT |
60.096 |
20 |
155 |
816 |
970 |
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