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Simple sequence repeat (SSR)
>UN39110
GTTAGCTAAAACCGCCGCGAAATCCACCTCCAAAACGCAGCGTATCATGGCCTCGTCAGAGCCGCTTGACCTAGTCGTAACCGTCGTCTCCGCC
AAGCACCTGAAGAACGTCAACTGGCGTAACGGAGAGCTGAAACCCTACGTCGTTCTCTACCTCGACTCGGATCACCACCGCGTCTCCACTCACT
CCGACGATTCCGTCAAACCGGTGTGGAACGAGCGGATCACTCTCCCTCTCGCCCGATCCGTCCACGAATCGGTCCTCAACGTCGAGATTCTCCA
TTCCGACGCGGCGAAAACACTCGTCGGCTCGGTTAGGTTTCCTCTGGTTCGGTTAATCGACTCGGAGGGAGGAGGAGGAGGAGCGATGGTTCCC
GAATCGATCAGCTCGCTGGAGCTCCTCCGTCCCTCGGGTCGGATTCAAGGGAAGATCCGCTTGAAGCTCTCCATCAAGGAGCGACCGTTACCTC
CTCCAACGCAGCGTCCTCAATCGCAGCCTAGAGATTACTATTCTACCCCTCAAGGAAACTATTATTACTCCCCAAGCCCTCCTCCTCCTCCTCC
GGCTCCGATCACCTCCCCGTCTCCTCATCGTGACTACAGAGAATTCTCACCTTCTCCTTACCCCTTCACCGATCACTACTACTCCGGATTCTAT
TACCCGCCTCCTCCGCCGCGTTCGATGTACGATCGCGCCTCCAATTACGGCCAGCCATCTGCTCCAGTCGATCGCGAGCCTCTTCCTTTAGCTC
CTCCTCGGTTTCCACCACAGCCGAGTGGACCACCATCAGCTCCCGTCGAAGCCTTTCAGGCGAACGAGTATAAGCCGCCGCAGCCGCAAGCTCC
TCCTGTGGGCTCAAGGTTGTCAAGTTACGGAGTGCCGAGCGGCCCGTCGGCTCCGGTGGATTACTCTCCTTATGATCACAGGCAGTTGCAGAAG
GCGATGGGCGGGTTGAGCTTGGAGGAAGAGAGAGCTGTTGCTGAGAGGTCTGAGAGTGACTTTGGAGCTAGGCCGAGCTTCAGCTATGGCCGTG
AGTATCGCCGTGAATGTTAGAAAAAGCTGTGGAATTTCTCAATGTGTGTGATGAAAAAAAGTTGTGGGGTTTCGCAAGTGTGTGTGTGTGTGTG
TGTGTGACGTTTCTAAGGCTCTGCTATCATCAGATTTTACCTTCGTGTTGGTGTTGAAAAGAATTATGAATTTGGTGAATTTCCTCTCTGAAGA
TATGATATGTGTATTTATTGCTTCTTTTATGTATGTGTCTGAAGAACAAGAGGTGCAAAAGGTGTCACCTCTTCTGTTCCTTTGTACATGTTTC
TAAAACAACTCTCTAGTTTCGTCC |
Primers for UN39110 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGTTTCCTCTGGTTCGGTT |
59.972 |
20 |
AAGCGGATCTTCCCTTGAAT |
60.039 |
20 |
122 |
317 |
438 |
2 |
TCGAGATTCTCCATTCCGAC |
60.158 |
20 |
AAGCGGATCTTCCCTTGAAT |
60.039 |
20 |
169 |
270 |
438 |
3 |
GTCGAGATTCTCCATTCCGA |
60.158 |
20 |
AAGCGGATCTTCCCTTGAAT |
60.039 |
20 |
170 |
269 |
438 |
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