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Simple sequence repeat (SSR)
>UN39188
AGAAAAAGGATGATCCCCAAAGTGTTTGAAACTCCACGGGGCTGCGTGAACGAGCTCCTGAACCCAACAGACACTCGGATATGTTCTTGAAGAA
GGTAACAACCAATGAAAAGGCTGATGACAGAGCCGATCCACCCTCCGCGTATATGGTGAACAAGGAAGTTTGGAGAGACTACCAGCAGAAGGAT
CAGAGAACCAGGCATCTCAAGCCAGTCTGGGAAATGCTTAGGGAAGAAAAGTCTGAGTACAACAGCAACGAAAGCTATCCATTTCCCAACGTCT
CCACTGAGGAAGTTAAAGATAACACCAGGAAGGGTGAGGAAGATGTATGGAATCAAGAGTGAAGTAAGCATCTTGGTTCTCCAATTGGTACGGT
CCAATATCAACAAGTAAATGGCGGAGAAAGAAGCGATCCATTTGACGAAGGAGACGCCAAAGGCTAAACCACCGAGGTTCGAAACATCGGTGAG
GAGTTTCTTGGCAGCGATCTTGAGCTCCTCCACGTCGGAATTGACTAAAGCAGCCGTACCCACGTCTGTCTTCATCGCCAGATAATCCACACGC
CCCATCTCCCTTTGTTGACGGTACTCTCGATCTCCGTAATGATAATTTCAAGGTTTTATATGAATTTTGATTTTCTTATAAATTAAAAACAATA
ATAATAATAATCGTCCAGCTATGTTTTAGCTATCCAGATTGTCTGTCTTCTCAGGAGTGATGATTCCC |
Primers for UN39188 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTGAGGAGTTTCTTGGCAGC |
59.997 |
20 |
GGGAATCATCACTCCTGAGAA |
59.079 |
21 |
261 |
466 |
726 |
2 |
TCATCGCCAGATAATCCACA |
60.033 |
20 |
GGGAATCATCACTCCTGAGAA |
59.079 |
21 |
185 |
542 |
726 |
3 |
CATCTCCCTTTGTTGACGGT |
59.966 |
20 |
GGGAATCATCACTCCTGAGAA |
59.079 |
21 |
160 |
567 |
726 |
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