 |
Simple sequence repeat (SSR)
>UN39246
AGGGGACCCTCTTCTCTTTTCACCCATTATCTCCTTCCTTCCTTCTCCGACAATGGCTACTTTCCTAACAGCTGTCGTTTCAATCAAACCCACA
CTCTTCTCATTCCACTCCGAGTCCTCCACCTCTTTGCAATCTCAGACCAATGCATTCGCTCTCAAAGCCAAAGCCTTTCCTTCTGTCCCCACAG
CCATCTCTCTTCCACGGACCTCCAGGACGAGACTCATCCCTCGCGCAACGATGGAGACGGAAGAAAAACCCGCTTTGGACCCTAACGCAGAATC
CTCAAGACGTGTCTACATCGGAAACATACCAAGAACCGTAACTAACGAACAGCTCACCAAACTCGTCGAAGAACACGGCGCCGTTGAACAAGTC
CAGGTGATGTATGATAAGTACTCAGGAAGAAGCCGTAGGTTTGGTTTCGCTACTATGAAATCAGTTGGAGATGCCAATGCTGTGATTGAGAAGT
TGAACGGCACTACAATTGAAGGACGTGAGGTGAAGGTTAATATTACAGAGAAGCCTCTAGAATTATCATCATCATCGTCTCCTGATTTGTCGCT
GCTTCAGTCTGAAGATGCAGCTTTTGTGGATAGTCCTTACAAAGTGTATGTAGGGAATCTGGCAAAGAGTGTTACTAAAGAGATGCTTGAGAGT
TTGTTTTCTGAGAAAGGCAAAGTTCTGAGTGCTAAGGTTTCGAGAGTGCCTGGTACTTCGAAATCTACTGGGTTTGGGTTTGTTACGTTTTCTT
CTGATGAAGATGTCGAAGCTGCTATCGTGGCTTTTAACAATTTTTTGCTGGAAGGACAGAAGATTCGGGTGAATAAGGCCTAGTGTGTGTGTGT
GTGACAGTGAGAGAGAGGGCGAGTCTTTTGGCAGAATCTTTTTTTTTTGTATTGTATTTGAGGAGTTTGTAATGCAAAACATTTAGAGCATAGT
GTCATTATCTTTGTAATCATTCTAAGGTGATGAAAGCATTAAGTTTATTTC |
Primers for UN39246 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGGGTTTGGGTTTGTTACG |
60.255 |
20 |
GATTCTGCCAAAAGACTCGC |
59.962 |
20 |
159 |
726 |
884 |
| 2 |
GGTTTCGAGAGTGCCTGGTA |
60.255 |
20 |
GATTCTGCCAAAAGACTCGC |
59.962 |
20 |
191 |
694 |
884 |
| 3 |
CGAAATCTACTGGGTTTGGG |
59.424 |
20 |
GATTCTGCCAAAAGACTCGC |
59.962 |
20 |
168 |
717 |
884 |
|
|
