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Simple sequence repeat (SSR)
>UN39253
AAACTGGACTCACTTAGACATATGAGATTAGAAGAAAGAAACAAAGTAATCAAATATTAAAGACACTTCCCAAGCAGGGAAGTAACACATCAAT
AAAGAAAGCTTACACAACCAGAGTTCCGATCATCATCCAAGACAAATAAATATATTAAAAAAAAACATCAGATCACAACATAGACAAGAAAACA
GATCTACTAATCTCAAATCTCATCTTCATCAACCTGATACTTCTTAATCAACTCAGAACAAAACACATCGCTAACATCCTTCTCGAACCCCATG
TTGTTCGCATGCCTAATCTGCTCAGCGATACCATTGTAATGGTTCAATATCACGCGCGACTGCTCACGCCCCTTTGAGATTTTCGAACAACCCT
TGTCCGAGCTTTTCACGAGCATCACATCGCACATCTCGTCTTTGTGGTCTTCGTGGACGACGAACATGTACTTCCCGTGACGGTTCGACACGGC
CACGTCACTGTAGATCTCTTCCATCGTCTTCCTGTCTTTGCAAGAAAGCTTCACCGTCGCGCCGGGAAGGACGTAGGAGGATTCGGCAGTCTCG
AAACCGAACTTGCATGTGTCGCAGTAAGTGATGCCTTGAACGACAAGAGTGTTCTTTCCGATGCGTGGCTGCTTCCTCGCCGCCATGGCTATCG
CCGGCAAGATGCAGAGGACCATCAAGATCACTAGTTTCGCCATTTTCGAGAAGAGAGAGTTAGAGAGAGAGAGTATGGATCGAAGTGCGAAGGA
AGTAAAGTCC |
Primers for UN39253 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGCAGTAAGTGATGCCTTG |
60.011 |
20 |
TTTACTTCCTTCGCACTTCG |
58.174 |
20 |
176 |
583 |
758 |
| 2 |
CGCAGTAAGTGATGCCTTGA |
60.011 |
20 |
TTTACTTCCTTCGCACTTCG |
58.174 |
20 |
175 |
584 |
758 |
| 3 |
TCGCAGTAAGTGATGCCTTG |
60.011 |
20 |
CTTTACTTCCTTCGCACTTCG |
59.164 |
21 |
177 |
583 |
759 |
|
|
