 |
Simple sequence repeat (SSR)
>UN39280
CGGCACGAGGCTCTCTCTCTCTCTCCTTTACAAAGCCTCAATCTTCGCTCTCCCTTCGCCGCGGTTTAGATCCGAGTTTGGGAGAAACAGCCTC
CCTAAGTTAAACAAAAAAGCACTCTACTTCAGTTTCCAATCTTTTTCTCTCCAGTCATGGCAGGATCCGCACCCGAAGGCACACAGTTTGATGC
ACGTCAGTTCGACCAGAAGTTGAACGATGTCCTTGAGGGACAGGATGAGTTCTTCACCTCTTACGATGAGGTTCACGACAGCTTTGACGCCATG
GGTCTTCAAGAAAATCTCCTCAGGGGTATCTACGCTTATGGTTTTGAGAAGCCCTCTGCGATTCAGCAAAGAGGAATCGTCCCTTTCTGCAAGG
GCCTCGACGTGATCCAACAGGCCCAGTCCGGTACCGGCAAAACCGCAACGTTCTGCTCCGGCGTCCTTCAGCAGCTGGACTTCACCATCGTCCA
GTGCCAGGCCCTCGTCCTCGCACCAACCAGAGAGCTCGCCCAGCAGATTGAAAAAGTCATGAGAGCACTCGGCGACTACCTCGGCGTCAAGGTC
CACGCCTGCGTCGGCGGAACCAGCGTCCGTGAGGACCAGCGTATCCTCCAGGCCGGCGTCCACGTCGTCGTGGGAACCCCTGGACGCGTCTTCG
ACATGCTCAAGAGACAGTCCCTCCGCGCGGACAACATCAAGATGTTCGTCCTCGACGAGGCCGACGAGATGCTCTCACGCGGTTTCAAGGACCA
GATCTACGACATCTTCCAGCTCCTCCCTCCCAAGATCCAGGTCGGCGTCTTCTCGGCGACCATGCCTCCCGAAGCTCTAGAGATTACGAGGAAG
TTCATGAGCAAGCCGGTGAGGATCCTGGTGAAGCGAGACGAGCTCACACTGGAAGGTATCAAGCAGTTCTACGTCAACGTGGAGAAGGAAGACT
GGAAGCTCGAGACGCTCTGCGACCTCTACGAGACGCTAGCCATCACTCAGAGCGTCATCTTCGTGAACACCAGGAGGAAGGTTGACTGGCTCAC
CGATAAAATGAGGGGCCGGGACCACACTGTCTCGGCCACTCACGGGGACATGGACCAGAACACGAGAGACATCATCATGAGGGAGTTCAGGTCC
GGCTCCTCGCGCGTGCTCATCACGACCGATCTGTTGGCTCGTGGTATCGATGTGCAGCAGGTGTCGCTGGTGATCAACTACGATCTGCCGACTC
AGCCGGAGAATTACCTCCACCGTATTGGAAGGAGTGGGAGGTTTGGGAGGAAAGGTGTGGCGATTAACTTTGTGACCAAGGATGATGAGAGGAT
GTTGTTTGATATTCAGAAGTTTTACAATGTCGTTGTTGAGGAGCTTCCTTCTAACGTTGCTGATCTCCTGTGAAGAGGGAGAGGTTCTCGCTGT
TCTAATCACACCGGAGAAGAAAAGGTTTTCTTTTGTTTTTTGAAAGGCACAACGACTACTCTTTGATTTGATTTTGACACTTCTCTCTCTCTCT
TTACGAACATATCTCTCTCTATCTCTCTTTTCCGACCATTTTTTATTTAAGATC |
Primers for UN39280 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGTTGCTGATCTCCTGTGAA |
59.984 |
20 |
AAAAATGGTCGGAAAAGAGAGA |
59.242 |
22 |
177 |
1371 |
1547 |
| 2 |
GAGGAAAGGTGTGGCGATTA |
60.074 |
20 |
AAAAATGGTCGGAAAAGAGAGA |
59.242 |
22 |
279 |
1269 |
1547 |
| 3 |
TCACACCGGAGAAGAAAAGG |
60.224 |
20 |
AAAAATGGTCGGAAAAGAGAGA |
59.242 |
22 |
132 |
1416 |
1547 |
|
|
