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Simple sequence repeat (SSR)
>UN39388
TTTGATCGTCTCGTCGTCCTCACAGTTTCATCGGCCGTTGACTATCTCCGGCGACAAGAGAGAGAGAGAGAGATCAGAATCGTATCGGTTTCTA
ATTTCTTTCTCGTTCAAGCTTATTAAAAAATGGCTGAAGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCGGTATGGTCAAGGCTGG
ATTTGCTGGTGATGATGCACCCAGGGCTGTTTTCCCTAGTGTTGTTGGTAGGCCAAGGCATCACGGTGTCATGGTTGGGATGAACCAGAAGGAT
GCTTACGTTGGTGACGAAGCCCAGTCCAAGAGAGGTATTCTCACCTTGAAGTACCCGATCGAGCATGGTGTTGTGAGCAACTGGGATGACATGG
AGAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTATTGCTCCTGAAGAGCACCCCGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGC
CAACAGAGAGAAGATGACTCAGATCATGTTCGAAACATTCAACTCTCCGGCTATGTATGTCGCTATCCAAGCTGTTCTCTCCCTGTACGCCAGT
GGTCGTACTACCGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCACACTGTGCCGATCTACGAGGGTTTCTCTCTTCCACATGCCATCCTCC
GTCTTGACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATTCTTACCGAGAGAGGTTACATGTTCACCACAACAGCAGAGCGGGAAAT
TGTGAGAGACATCAAGGAGAAGCTTTCCTTTGTCGCTGTGGACTACGAGCAGGAGATGGAGACTTCCAAATCCAGCTCCTCCATCGAGAAGAAC
TACGAGTTACCCGACGGACAAGTGATCACCATCGGTGCCGAGAGATTCAGGTGCCCAGAGGTTCTTTTCCAGCCATCGTTCGTGGGAATGGAAG
CTGCTGGAATACACGAGACGACCTACAACTCGATCATGAAGTGTGACGTGGATATCAGGAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGG
AACCACTATGTTCTCGGGGATTGCAGACCGTATGAGCAAAGAGATCACGGCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCTCCC
GAGAGGAAGTACAGTATTTGGATCGGTGGTTCAATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCCAAGGCTGAGTACGATGAGG
CAGGTCCAGGGATTGTTCACAGGAAATGCTTTTAAGCTCTCTCTCTCTCAATGAGAAGGCTACACAAGCTGGGTATTATGAATGGGATCAAAGT
TTTTTTTTTTTGTTTCTATTTGCTTCTCCATTTGTTTGTTTCATTTGCTTTCTTTTTGTTGTCGTTTCTATGCACTTGCGTGTGACAAAACTCT
CTGGGTTTTACTTTACGTCTGCGTTTCAAGAAACAGCTTTCGTTTTGCGTTTTAGTCCCATTGTTTTGTAGCTCGAGTGCGCCTCTATTTTTCT
GTATTTCTTTCAAAAAAACTGGGAAGAAGGAGCTTGATAATACTCTTTGCATTTGTTAATATAAAGTATTGTACG |
Primers for UN39388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGTCCTCACAGTTTCATCG |
59.831 |
20 |
CGGTACCATTGTCACAGACG |
60.025 |
20 |
159 |
14 |
172 |
| 2 |
TCGTCCTCACAGTTTCATCG |
59.831 |
20 |
TCCTTCTGGTTCATCCCAAC |
59.903 |
20 |
268 |
14 |
281 |
| 3 |
TCGTCCTCACAGTTTCATCG |
59.831 |
20 |
TTCTGGTTCATCCCAACCAT |
60.173 |
20 |
265 |
14 |
278 |
|
|
