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Simple sequence repeat (SSR)
>UN39388
TTTGATCGTCTCGTCGTCCTCACAGTTTCATCGGCCGTTGACTATCTCCGGCGACAAGAGAGAGAGAGAGAGATCAGAATCGTATCGGTTTCTA
ATTTCTTTCTCGTTCAAGCTTATTAAAAAATGGCTGAAGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCGGTATGGTCAAGGCTGG
ATTTGCTGGTGATGATGCACCCAGGGCTGTTTTCCCTAGTGTTGTTGGTAGGCCAAGGCATCACGGTGTCATGGTTGGGATGAACCAGAAGGAT
GCTTACGTTGGTGACGAAGCCCAGTCCAAGAGAGGTATTCTCACCTTGAAGTACCCGATCGAGCATGGTGTTGTGAGCAACTGGGATGACATGG
AGAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTATTGCTCCTGAAGAGCACCCCGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGC
CAACAGAGAGAAGATGACTCAGATCATGTTCGAAACATTCAACTCTCCGGCTATGTATGTCGCTATCCAAGCTGTTCTCTCCCTGTACGCCAGT
GGTCGTACTACCGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCACACTGTGCCGATCTACGAGGGTTTCTCTCTTCCACATGCCATCCTCC
GTCTTGACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATTCTTACCGAGAGAGGTTACATGTTCACCACAACAGCAGAGCGGGAAAT
TGTGAGAGACATCAAGGAGAAGCTTTCCTTTGTCGCTGTGGACTACGAGCAGGAGATGGAGACTTCCAAATCCAGCTCCTCCATCGAGAAGAAC
TACGAGTTACCCGACGGACAAGTGATCACCATCGGTGCCGAGAGATTCAGGTGCCCAGAGGTTCTTTTCCAGCCATCGTTCGTGGGAATGGAAG
CTGCTGGAATACACGAGACGACCTACAACTCGATCATGAAGTGTGACGTGGATATCAGGAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGG
AACCACTATGTTCTCGGGGATTGCAGACCGTATGAGCAAAGAGATCACGGCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCTCCC
GAGAGGAAGTACAGTATTTGGATCGGTGGTTCAATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCCAAGGCTGAGTACGATGAGG
CAGGTCCAGGGATTGTTCACAGGAAATGCTTTTAAGCTCTCTCTCTCTCAATGAGAAGGCTACACAAGCTGGGTATTATGAATGGGATCAAAGT
TTTTTTTTTTTGTTTCTATTTGCTTCTCCATTTGTTTGTTTCATTTGCTTTCTTTTTGTTGTCGTTTCTATGCACTTGCGTGTGACAAAACTCT
CTGGGTTTTACTTTACGTCTGCGTTTCAAGAAACAGCTTTCGTTTTGCGTTTTAGTCCCATTGTTTTGTAGCTCGAGTGCGCCTCTATTTTTCT
GTATTTCTTTCAAAAAAACTGGGAAGAAGGAGCTTGATAATACTCTTTGCATTTGTTAATATAAAGTATTGTACG |
Primers for UN39388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAATTCTTGCTTCCCTCAGC |
59.955 |
20 |
TTGTCACACGCAAGTGCATA |
59.902 |
20 |
245 |
1160 |
1404 |
| 2 |
AATTCTTGCTTCCCTCAGCA |
59.955 |
20 |
TTGTCACACGCAAGTGCATA |
59.902 |
20 |
244 |
1161 |
1404 |
| 3 |
TGGTTCAATTCTTGCTTCCC |
60.051 |
20 |
TTGTCACACGCAAGTGCATA |
59.902 |
20 |
250 |
1155 |
1404 |
|
|
