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Simple sequence repeat (SSR)
>UN39471
GGGCGTCCGTCTCTCTTCACTTGTTATCTTCTTCCAGTCCTTCGTAGGGAAACAGGAACCCTAATCATCAAATCTCAAGATGAATCGTGAGAAG
TTGATGAAGATGGCTAACACTGTCCGCACTGGCGGAAAGGGTACTGTTAGAAGAAAGAAGAAGGCTGTGCACAAGACCAATACTACCGATGACA
AGAAGCTTCAAAGCACCTTAAAGAGAATTGGAGTTAACTCTATTCCTGCTATTGAGGAAGTTAACATCTTCAAGGATGATGTTGTTATTCAGTT
CATCAACCCTAAAGTGCAAGCTGCAGTTGGTGCAAACACATGGGTTGTTAGCGGTTCTCCTCAGACCAAAAAATTGGAAGATATCCTTCCTCAG
ATTTTCAGCCATCTCGGACCAGACAACATGGAGAATCTGAAGAAGCTAGCAGAGCAGTTCAAGAAGCAATCTCCTGGTGGAGGCAATGTCCCAG
CAACCATACAAGAGGATGATGAGGACGACGATGATGTCTCGGATCTTGTAGCTGGTGAGACTTTCGAAGCCGCCGCTGAAGAGAAAGTAGCTGC
TGCTCCTTCTTCTTAAGGCAAAAGAGCGAGAGACCACAACAACAACAACAAAACCGCACTTGAATTATATTACATATCTTTATAATTTTGCTTG
TTCGCTCTATCCTCTTTTTGTAGTGTTTCCTACCAGATTCTTGTTTCCCAGATAATGATTTAAAAGTTTTTATCCAGTTGATCTGTT |
Primers for UN39471 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTGGTGAGACTTTCGAAGC |
60.142 |
20 |
GAGGATAGAGCGAACAAGCAA |
59.606 |
21 |
152 |
521 |
672 |
| 2 |
AGAAGCAATCTCCTGGTGGA |
59.803 |
20 |
GAGGATAGAGCGAACAAGCAA |
59.606 |
21 |
235 |
438 |
672 |
| 3 |
AGAGGATGATGAGGACGACG |
60.223 |
20 |
GAGGATAGAGCGAACAAGCAA |
59.606 |
21 |
192 |
481 |
672 |
|
|
