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Simple sequence repeat (SSR)
>UN39486
GGATCGCTCGTGAAATCTCCAGAGAAAATGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGGGGAGAGAGAGAGAGATCTGAAT
CGAAAGAAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAATATGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAG
ACTCGTCTTGCCAAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGAGGTTCATAGGTTAGTGGTGAACCGCGACGCAA
AATTCACCAATTTCGTTGAGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTCTCCGTGTGCGTGGATATAACGGACAA
TGAGTTGGCTTACCTTGAGTGCATCCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGCTTGATCTCGTCTTCAACTTC
CACAAGGTGTACTTGATACTTGATGAATTCATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAGGATGTCAGAGCTCG
AGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCTGGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAGAGATTTGA
TATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGATTATTTGTAAAAGGATATGAAACGATTCTGTTGAGTTCTCTATCCAAAATTTG
CTTTATGTAAGATTTTCTTTCAACTAGTGAGGTTACTTGCTAGTTACCACAGCCAT |
Primers for UN39486 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAGAACAGGCAAGGGAAGAC |
59.844 |
20 |
TTCTCGGATTCTTCGAGAGG |
59.502 |
20 |
184 |
49 |
232 |
2 |
CAGAACAGGCAAGGGAAGAC |
59.844 |
20 |
TCGACTTTGTGTTTCTCGGA |
59.415 |
20 |
196 |
49 |
244 |
3 |
CAGAACAGGCAAGGGAAGAC |
59.844 |
20 |
AATTGGTGAATTTTGCGTCG |
60.866 |
20 |
246 |
49 |
294 |
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