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Simple sequence repeat (SSR)
>UN39487
AGAGAGAGAGAGAGAGAGAGCATATACAAAACAAAAAAAACACCCTAGCCAAAGTTGGAGAAGAAAGAAGAAAATGGAGCAGTCTTATGTGTAT
GCTTACCCACCAGGCACGGCTCCACCGCCTCCACAAGGCGGTGGCATCGCCGGAGTGATAGTGGATCCAAGGTTCTGTGCTCCGTATCCCGTGG
ATCTGGCGATCGTGCGGAAGATGATGACGTTGACTGATGGTAACTTCGTTATAACGGACGTTAACGGGAACTTGCTGTTCAAGGTGAAGGAGCC
AGTGTTTGGTCTTCATGACAAGAGGGTTTTATTGGATGGTTCTGGATCTCCTGTCTTGACTTTGAGAGAGAAGATGGTGAGCTTGCACGACAGG
TGGCAAGTATTTAGAGGAGGGAGTACGGAGCAGCGTGATCTGCTGTACACGGTTAAGAGATCGTCGATGCTTCAGTTTAAGACCAAACTCGATG
TGTTTTTGAGTCACAATAAGGATGAGAAGAGATGTGATTTTAGGGTCAAAGGGAGCTGGTTCGAGCGCTCTTGTGTCGTCTATGCCGGCGAATC
TGACGCCATCGTTGCCCAAATGCACAAGAAGCACACGGTGCAGAGCGTGTTCTTGGGAAAAGACAATTTCTCGGTGACTGTTTATCCAAACGTG
GACTATGCCTTCATTGCCTCTCTCGTCGTCATTCTCGATGATGTTAACCGAGAAGACCGTGCCGCAGGCAGCAGCTGATCAGATCAGACGTGCG
TGTGTGTGTTGTGTGTGTGTGAGAGAGAGAGAGCTTGCTCGCTCGCTTGCTCACGTATTAGTTATGCTTTTGGCTTTGTATTGTACCTATATTC
TCTAAACTTTGCACTTTGGAAGGTGGACTTGTTCTTTGTGTGATCTTTCCAGTTGTAAAATAATACAAATGTATGTATTGTTAGCCGTCACTTA
CTTTCTTACATAAATATTACTATATGTTATGTTT |
Primers for UN39487 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTTCATTGCCTCTCTCGTC |
59.95 |
20 |
CCACCTTCCAAAGTGCAAAG |
60.659 |
20 |
207 |
666 |
872 |
2 |
TCTCGTCGTCATTCTCGATG |
59.942 |
20 |
CCACCTTCCAAAGTGCAAAG |
60.659 |
20 |
194 |
679 |
872 |
3 |
CCAAACGTGGACTATGCCTT |
59.993 |
20 |
TAATACGTGAGCAAGCGAGC |
59.234 |
20 |
163 |
650 |
812 |
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