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Simple sequence repeat (SSR)
>UN39876
GGAACATTCTCACAAATCTCATTTTCTCTCGCTTCTGAACTCTCGATCGAACACGTATAGTGTCCGGCGCATCTCTCTCTCTCTCTTGCTCCTT
TTATCAAACTGTAAGAGCAGCAGAGCCTGTTCCCGGAGATTTAATATTTGTCGGATCTTAAACAAAAAAAGGATCTCCTTTTCTTCTTACCCAT
CACTCCAGAAAATGTTTGGGACTCTCGCTTCCGGAGATATCGAAACCGCCAGATTGAGGCGCGATTTGAGGATCACGTGCAATCTAGGGTTCTC
CTGCGGTGGTGGATTCGAAGACATCGGTATGCGATTAGAAGGCGAGAACTTGTTGCCCCACGGAGGCGACGACGGAGAAGTGGTGAACGAAACG
GCGCCGTTTCATGTCGAGCGTCCACTGTTTCAGCAGACGCAGAAACTCGTGGGGGGGTATGCTCTTACTTCCAAGAAGATGAAGAGTTTCTTGC
AGCCCAAGCTTGAATACATGGCTAGGAGGAAAGGCATTTGCTTTGTCCCCATCGATTTGAACCGTCCACTTTCTGACCAAGGACCATTTGATGT
CGTTTTGCACAAGTTACTGGGAAAAGAGTGGCAAGAGGTTATTGAGGATTACCAGCAGAAACACCCGGAAGTGACTGTGCTTGATCCTCCAAGT
GCAATAAAGCGTATATATAATCGACAATCGATGCTTCAGGGCATGTCAGATTTGAATCTGTCAGATTGCGGTGGCAGCATTTATGTTCCAAAGC
AATTGGTTGTCTTGAATGATTCAGCATCTAGTGCTGATAGAGTTGTTGAAGCTGGTCTTAAATTTCCACTAGTTGCAAAGCCACTCTGGATCGA
TGGAACTGCAAAGTCACATCAGTTGTTCTTAGCTTATGACAAGCGCTCGCTGGCAGAGCTTGAACCTCCTTTAATCCTGCAAGAGTTTGTTAAT
CATGGTGGAGTTATGTTCAAGGTTTTCGTGGTGGGTGATATCATAAAAGTAGTGAGACGGTTCTCTCTACCAAACGTGAGTAACTGCGACAAAG
CCAAAGCTGACGGCGTCTTCAAATTCCCGAGGGTTTCATCTGCAGCTGCTTCAGCGGATAACGCAGACTTGGAACCTAGTGTTGCTGAGCTGCC
TCCAAAGCCTTTCCTCGAAGCCCTTGTGAAAGAGCTACGAACCTTATTGGGACTTCGGCTTTTCAACATAGACATGATCAGAGAGCATGGGAGC
AAGAACGTGTTTTCTGTTATTGACATCAATTATTTCCCGGGTTACGGAAAGATGCCAGATTACGAGCCAGTAGTTGTAGACTTTTTCCACAAGC
TGGCGCAAGCGAAACATAATAAGAAGAGACCCTGTAAATGAAAACTTTGGGAGAGAGGAGAGGAGAGGAGAGGTATCAGATGTTTCTTCTTCCA
AGGAGGGTTTGGTTTTTAAACTGATGTAAGAGCAGTGAAGGAAAAAAAAAAGAGAATAATTAATGACTAATTATTATGTATTTGTACAGAGCTA
GCTCTCTCACCTTTGGAAAAGCTTTTTCAG |
Primers for UN39876 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAACTCTCGATCGAACACG |
59.984 |
20 |
ACCGCAGGAGAACCCTAGAT |
60.096 |
20 |
254 |
36 |
289 |
2 |
TGAACTCTCGATCGAACACG |
59.984 |
20 |
CGCAGGAGAACCCTAGATTG |
59.83 |
20 |
252 |
36 |
287 |
3 |
TGAACTCTCGATCGAACACG |
59.984 |
20 |
ATGTCTTCGAATCCACCACC |
59.786 |
20 |
271 |
36 |
306 |
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