 |
Simple sequence repeat (SSR)
>UN39897
TAGAGGAGATTAAAGTTGCCGCTTCCTTTGATTTCATTCTCCGGAGGAATCAATCACTCTTTTTCTCCGAAAACAAAAGAAAAATGCAGAGGAA
TGGGATGAGAAGAGCCCATTCTTTATGGTGCAAGAGTTTAACACACAACTTGCATCATCATCATCATCCGTCTATTCCAGTCACCACCACCACC
ATGTCTAGTTTGGAGGAGCTGAGCTCCATAGACAGGATCCAGAGGAGGGTAACAGATTGCAATGATGGTAAAAGCTTCCGTATGCATTCTCGGA
AAGTATCTCAACGGCAACTTGTATTTGGCAACTCATCAGTTTCTGGCACTCTATCCAAACATTTTCACACCTTACCACATTCACTTAACAAGCA
GCACCAGCTCCTTAGAGAAGTACCCAAGTTTGTGAAGATTGTAGAAGTTGGTCCAAGGGATGGCCTTCAGAACGAGAAAAACATTGTTCCCACT
TCTGTTAAGGTGGAACTCATTCGGAGATTGGTTTCTGCTGGTTTGCCCGTTGTCGAAGCTACTAGCTTTGCCTCTCCTAAATGGGTTCCCCAGC
TTGCAGATGCAAAGAATGTAATGGATGCAGTTAATACTCTACATGGGGCGACTCGATTGCCTGTTCTGACTCCCAATCTTAAAGGTTTTGAAGC
AGCTGTGTCTGCAGGTGCTAAGGAAGTTGCAATCTTTGCATCGGCTTCCGAGTCATTCTCTTTATCAAATATTAACTGTTCCATCGAAGAGAGT
CTCTTGAGATATCGTGCTGTTTCCACCGCTGCAAAGGAGCTTTCCATTCCTGTCCGTGCGTATGTATCTTGCGCGGTGGGGTGTCCAGTGGAAA
GGAGCGGTTCCACCTTCAAAAGTAGCGCATGTTGTTAAAGCGCTCTATGACATGGGCTGCTTTGAGATTTCTCTTGGTGATACAATTGGAATCG
GCACTCCTGGTACTGTGATTCCCATGCTTGAAGCCGTGATGGCAGCTGTGCCAGGGGAAAAGCTGGCTGTTCACTTCCACGACACCTATGGACA
AGCTCTTTCAAACATATTGGTCTCTCTCCAAATGGGAATAAACATAGTAGACTCATCAGTTGCTGGATTAGGGGGTTGCCCATATGCAAGAGGA
GCGCCAGGAAATGTAGCAACAGAAGATGTGGTTTACATGTTAAACGGTTTGGGGGTCCAAACCAACGTCGATTTGGGAAAGCTTATAGCTGCTG
GAGATTTCATCAGCAAGCATCTTGGCCGTCCTAACGGTTCCAAGGCTGCTGTTGCTCTCAGCCATCGGATCACAGCTGATGCCTCCAAGCTATG
AATGGAGCTCATTAGTATCGGAAGATGTGCGTTTATGTTTATGTTTGGTTTTCGGAATATTTGTCATTGTGTTCATTCACACCAAAAATAAGTA
ATCAGTAGACAGACACTCTCTGTGAGATAAGCTTCTGCTTTGTAAAACTCCTTTTCACTATAATGATGATACTTACGG |
Primers for UN39897 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCCGGAGGAATCAATCAC |
60.011 |
20 |
GCCAAATACAAGTTGCCGTT |
60.003 |
20 |
274 |
38 |
311 |
| 2 |
ATGCAGAGGAATGGGATGAG |
60.034 |
20 |
GCCAAATACAAGTTGCCGTT |
60.003 |
20 |
228 |
84 |
311 |
| 3 |
AAATGCAGAGGAATGGGATG |
59.894 |
20 |
GCCAAATACAAGTTGCCGTT |
60.003 |
20 |
230 |
82 |
311 |
|
|
