 |
Simple sequence repeat (SSR)
>UN40006
GGAGAATTAAAAAGAATAGGGTTAAGCTTCTTTAGCATCTCAACGCTGTTCATGCACCACACACATATATCCAATCAATCAACCACTGATAGTA
CAAGATATTGTCTACTCAAAAGTTTGTGAAACAGCTTTTGTAAACAAGACTAGCTTATAAGAGAACCCAAATAGATTCAGCAGCAGCAGCAGTA
GCAGCAGCAGCAGGAGTTCATAAGAAGAAAACTACATCCAAAAGTGTGATCTAAATTAAGCAGCAGCAGCTTCCAGAAGCTCTTGATCGAAATG
CCATGTTCCATGCCCTTTGCCGAGTCTTCTGAGCTGAGCCACATATTCAGAGATTTTCTTAATCGCTTCAACCTGTTCGTTCAAAAACTCGCTC
TCAGTGAAATCTGCCAGCTGTACATCATCGTTCTTCGAAGCCACACTGTGCACGTTGAGGAGCTTTTCATTGAGCAGCTTCTCCAACGATAGAG
CCAGTTCCATTGCATAGAGAGCATCTCCTTTCTCGGCGTGACCAAACTCAGACTGAGGCATCACCATGGGCTGTAACTTAACCCTTCCACCACG
CTTGTTCTGATACTCCATCAACATCTCAGCATGGTCACGTTCTTCCACACTCGAGTCCTTGAAAAACTTGGAAAGACCTTTGAGAGCAACGTTA
TCACGATCAAAGTAAGCGTACAAGGCGTGATACACATAAGACACGTTGTACTCCACATCGATCTGCTCATTCACGGCGGCTTCGCACTCGGGAG
AGTACAGATGGCGAGCGAGCGAGAGCTGTGGACTCGAAGGGACGAGATCGAGCTCTTTCTTCACCTCCTCAAACGGCTCGAAAACGACACCTCT
TAGGGTTTGCGTAGAGGCAGAAACAGAGAAGGAGAGGTTTCGTGATTTTCCCGAGGTAACAGGAAGAAGACTCAATGAGGATGAGGAGGAGGAG
AAGAGAGGAGAGATGTCCTTCTTGGCTCCATGGATGTTCACGAGGGAGAAAGCAGAAGCTGATTTGAGAAGCATTTTTGTGTGTATGAATCTCT
CTCTCTCTCTCTGCTGCGAAATGGGAGGAGGAAAGGGTTTGTCTGTCGCCC |
Primers for UN40006 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCTTCACCTCCTCAAACGG |
60.224 |
20 |
GACAAACCCTTTCCTCCTCC |
59.912 |
20 |
269 |
809 |
1077 |
| 2 |
TGCGTAGAGGCAGAAACAGA |
59.74 |
20 |
GACAAACCCTTTCCTCCTCC |
59.912 |
20 |
224 |
854 |
1077 |
| 3 |
GACACCTCTTAGGGTTTGCG |
59.734 |
20 |
GACAAACCCTTTCCTCCTCC |
59.912 |
20 |
240 |
838 |
1077 |
|
|
