 |
Simple sequence repeat (SSR)
>UN40009
GGATTTCTTTGAACTTTTCTTACTTGCAGATTTGTTAATTAACTAAGAACAAAGATTGTCTAAAAGATTACAGCTTTGCTGATAATATTCATTA
CATAGGCTCTCAAAAGGATGATACATGGTTTACCAATTCTATTAGGAACAGTCTGTTCATGCAATGCAAGTCCCCATCGCCTCATTGTAGTTTC
AGAGCTTGACTTCCACATCAACACCAGCAGGAAGATCCAGCTGCATCAAGGAGTCGATGGTCTGAGCAGTCGGGTAGAGAATATCAATCATCCG
CTGGGGGGTCCTGATCTCGAAATGGAACCTTGCATCCTTGTGGACGTGGGGGGACTTGAGAACACAGTAAATACGCTTCTTGGTTGGCAAGGGA
ACAGGACCCATCGTCTTGGCATTGGTGTTCCTCGCAGTGTCGAGTATCTGCTTGCATGAGTCCTCAATGAGAGGCACCCAGTATGACCTAAGCT
TGATCCTAATCTTTTGCTTTGGCGCCATCTTCTTACAAAAATAAAACAAACTTCAAAAACATCTCTGGTGTTGTAAAAAAAAAACAGGATTCCA
ATCTGAACATGATAGTGGTCTGAAAACTATCTACTTAATGTCATTTCTTACTACAGAGAAGACAGTTCCGAGCAATGTAAGAACCAAAAAGACA
CCAACTTTGAGAAATCTGCATAGAACATTCTAGTAGTGAGCTGGAAGATATACCTTATCTGCGTCTACACTTATTGAGGAAGAGCTTGGAACCT
CGGAGAAGTCCTCAGAGGCGGGTTCTTCGAGGGTTTCTGGAGTTAGGGTCTCGGGAGCTGCGAAGACCTTCTTCGTAAACGAGATGGAGGGTTT
GTTAAGGACGCAGGAGCCAATGCCGCCATGAGTAGAAGAAGATGGAAGCAGAGAGACTTTCTGTTTGGTAGAAGAAGAAGAAGATGAAAGGTTG
GCGAAAGAGGGTAATATGAAGGAAGTTACAGAAGAAACCGCCATTGAATTTCCAGATAAAGAATCGATTTATCTTCTTCTTCTTCCTCCTCTTA
AACGCTTCACAAGGATGTGGTTTTCTCTTCCGCAGCTTCGTCGTTCCGAGGGTTATCCGTTATCCAATCC |
Primers for UN40009 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCGCCATGAGTAGAAGAAG |
59.978 |
20 |
TGGATAACGGATAACCCTCG |
59.778 |
20 |
233 |
868 |
1100 |
| 2 |
TGGAGGGTTTGTTAAGGACG |
59.964 |
20 |
TGGATAACGGATAACCCTCG |
59.778 |
20 |
264 |
837 |
1100 |
| 3 |
GGTTTGTTAAGGACGCAGGA |
60.11 |
20 |
TGGATAACGGATAACCCTCG |
59.778 |
20 |
259 |
842 |
1100 |
|
|
