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Simple sequence repeat (SSR)
>UN40041
GAAAACAGATTTATATAGATATTTTTTTTTTGGCCAAAATACGTTTTTCTATAGATGTTCAGCATCATAGACCAAACTCACAACATAGCAACTT
CCAAACAGGTATAGTGAGTGGAGACACCAACAAAGAGTTTCATACTTAAGTCTCTCTCTTTATTTTTCATTTATAAACACTACTGCTACTAGTA
GTAGTAGTAGCCAATTTGATCATTCATTTAACGTAAGTCACAAACCAATCAAGCATCTCTTTGTGAGCTTCTTCTGCAGCTTTAACCGCCTCTG
GGTCATCCGTCTTGTACCTAACTGTCCAACCGTGTGCTACTTTAGGGTGTATCTTCACATAACTATTCACCTCAGGTTTGGCAGCAAGAATCTC
CTCAAATTGCTTCAAGAGCGCAGGTGGAGACAACTGATCAATCTCAGCTCCTAGTATAGCAATTGGCACCTTCACACCCTTGATATCGTCGACC
GTGACCAAAGAAGGATGAAGCAGAACAGCTGCTTGAACAAGCTCTTGCTTAGACAATTCCACCACCACTTTTGCACCCCAACACATCCCTGCAG
CTCCAATAGCAGTTATGCCTTTGCTCTTTAAGGCTTCAATTACTGGCTTTGTGTCTTCAAATCCCTTATCAGCGCCATGGTCTTTGAGCCAGAG
AGGGATGGGTCTCTCTTGATTAGAAGGATCAAAAGGATCTCCGTAGAAGTAATCAGGAACCACGACATAGAATCCAGATGTTGCAACCTTATCC
GCAAGCGCCCTAATTTTGTAAAATGAGAGCTGAAAGTAGAGACTTTTATCCAATTTGTGGATCC |
Primers for UN40041 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAGTGGAGACACCAACAAAG |
58.762 |
21 |
AGGAGATTCTTGCTGCCAAA |
59.955 |
20 |
270 |
109 |
378 |
2 |
TGAGTGGAGACACCAACAAAG |
58.762 |
21 |
CTGCCAAACCTGAGGTGAAT |
60.111 |
20 |
258 |
109 |
366 |
3 |
TGAGTGGAGACACCAACAAAG |
58.762 |
21 |
ACAAGACGGATGACCCAGAG |
60.112 |
20 |
189 |
109 |
297 |
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