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Simple sequence repeat (SSR)
>UN03604
GGAGCTTCGAACATCAGACAATTCAACTAGCAAACCCCCATTAACGAAAGATGTCAGTGGCTTCGCCGATTCAATGTATTAGGATCCTTAATCC
ATATTCTTCTTCTTCTACAACTTCATCGTCTTTCAGATTCTCTAGGAGTAAGCCATGTGTCTTCATCATCAGATGTTCTCAGGCCGAAGGTCCA
TTGAGAAGGCCATCTGCTCCTCCTACTCTCCGGGAGCCTACGCCTCCGCAAAAACCTGTTCCTCCTACTTCCTCTTCTTCTTCTTCTTCTTCTT
CTCCACCGCTGCAGCAAACGGTGGCTGTTGATGGTAAGAGTGTAGTTACGGTGGAGTTTCAGAGGCAGAAGGCTAAAGAGCTTCAGGAATACTT
TAAGCAGAAGAAGCTTGAAGCTGCTGGTCAAGGTCCCTTCTTTGGTTTCCAACCCAAAAACGAAATCTCCAATGGAAGGTGGGCTATGTTTGGT
TTTGCGGTGGGGATGCTTACAGAGTATGCAACAGGCTCAGACCTTGTCGACCAAGTTAAAATCCTTCTCTCCAATTTCGGCATTATAGACTTGG
AATAATAAAAGAGTGTTGTTCTTCTTCTCGTCTCTCAATCTTCTATCTTGTTTCTCATTCTTCCTTCCTGTATATGTTATTTCTAGATATCTTA
AATACATTGGACCATTTGTGTATTCAACCTCTTTTATCTTCAATTAGTAATAATAATAATAATAATATCATCTATGTATC |
Primers for UN03604 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTGCTCCTCCTACTCTCCG |
59.697 |
20 |
ACCGCAAAACCAAACATAGC |
60.003 |
20 |
278 |
201 |
478 |
| 2 |
TCTGCTCCTCCTACTCTCCG |
59.697 |
20 |
TGGGTTGGAAACCAAAGAAG |
59.942 |
20 |
232 |
201 |
432 |
| 3 |
TCTGCTCCTCCTACTCTCCG |
59.697 |
20 |
CAAAGAAGGGACCTTGACCA |
60.081 |
20 |
220 |
201 |
420 |
|
|
