|
Simple sequence repeat (SSR)
>UN40091
GGAGGGATTCAGGGAGGCGAGAGAGATAGAGAGGTTCATTTCGATTTCTCTTCGAAAAATTAAATTAATCGAGAGATGGTGAGGATGGTGAGAA
GCTGCTTACAGTCGATGATGAAGCTGGTGAATTCCCTTGTTGGAACGGTTGGTGTCGCCATGATCCTCTACTCTGTTTGGCTCATCAGGCAATG
GCAACAACAAACCGGATCTCTCCCCTTCCCTTACCCTCATGATGATCACCCCCTTCCTTGGTTCATTTATGCTTTTCTTTGTCTCGGGGCTCTT
CTCTGTCTTGTCACTTGCGCCGGCCACATCGCTGCTGAAACCGTTAATTCTTGTTGTCTTTACTTTTATATGGGATTCATCCTCTTGCTTATTA
TGATTCAAGGTGGTGTCGTTGCCGATACCTTTCTTAACCCTGACTGGAAACAGGACTTTCCAGATGATCCAAGTGGTGCCTTCATCCGTTTCTC
TAAGTTCGTTGAGTCAAACTTCAAGATTTGCAGATGGATTGGTCTCTCCATTTTCTTTGTCCAGGGTGCTTCAGTTCTATTGGCCATGTTGCTC
AAAGCTCTTGGACCTCACCCGCATTATGACAGTGACGATGAATATGATTTGAGCACGGTTTCACTCCTTCGTGATGCCCGCCAGCCTCATCGTC
CATACGTTGTTGGAGAACCCATTTATGGACCCAAACCGGATTCCTGGACTGTTGATTAATGAAAGAGCCAACCGGTAAGAGAGATGGAGCCCAA
GAGAAAGCTATGAGAAGCAAAGTAGCCAATAGTCACCTCTTTTACTTTGCTTCTTTGTTGCATCTATCTATCTATCTATCTCTCACTCCAAAGT
CCAACAAAACCACTATGTCTTGTAAAAAAAATATTGCATACACACATATGGGGATGTGTACTTATGCGTTTTAAAAACTACAATATATA |
Primers for UN40091 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGATTCCTGGACTGTTGAT |
59.927 |
20 |
CGCATAAGTACACATCCCCA |
59.42 |
20 |
220 |
695 |
914 |
2 |
TGGAGCCCAAGAGAAAGCTA |
60.088 |
20 |
CGCATAAGTACACATCCCCA |
59.42 |
20 |
172 |
743 |
914 |
3 |
CATCGTCCATACGTTGTTGG |
59.84 |
20 |
CGCATAAGTACACATCCCCA |
59.42 |
20 |
263 |
652 |
914 |
|
|