 |
Simple sequence repeat (SSR)
>UN40110
ACGCTTAAAAATTACCCTCAGCCAAAAGTGATTAAGCAACACCAGTTTCTAAAGAGAGTACAACAACCATAGATCAAGCAGGAGCAGCAGTTTA
TTAGAGATTACAACCAAAAATAGCTTAAGCAGCAGCAGTTTATTAGAGAAGCTCCTGATCGAAATGCCATGTCCCATGTCCTTTGCCGAGTCTT
CTTAGTTGAGAGACGTACTCCGAGATTTTTAATTGCTTCAACCTGTTCGTTCAAAAACACGCTCTCAATGAAATCAGCCAACTGGACATCATCG
TTCTTGGAAGCCACACTGTGCAGGTTTAGGAGTTTTTCATTGACCAGTTTCTCCAATGATAGAGCCAACTCCATGGCATAGAGAGCATCTCCTT
TCTCAGCGTGGTCAAACTCAGACTGAGGCATCACCATAGGCTGTAGTTTAACCCTCCCACCACGTTTGTTCTGATACTCCATCAACATCTCAGC
GTGGTCTCGTTCTTCCACACTCGAGTCCTTGAAAAACTTGGCAAGACCTTTGAGAGCAACGTTGTCACGATCGAAGTATGCGTACAGAGCGTGA
TACACATAAGACACGTTGTATTCAACATTGATCTGCTCGTTCACGGCGGCTTCGCACTCAGGGGAGTACATATGTCGAGCAAGAGAGAGCTGCG
GACTCGAAGGGACGAGATCGAGTTCTTTCTTCACTTCCACAAACGGCTCGAAAACGACGCCGCTTAGTGGCTGCGTGGAGGCGCGAACAGAGAA
GGAGAGGTTTTTCCCGGAGGTGAAGAGAGGAGAGACGTCCTTCTTCACACCGTGAACGTTCATGAGGGAGAACGTAGAAGCAGTTTTGAGAAGC
ATCTTTGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCAGCGAAGAAATGGGAAGAGGGAAGAAGGGTTTGTGTCC |
Primers for UN40110 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AACGTTCATGAGGGAGAACG |
60.111 |
20 |
CTCTTCCCATTTCTTCGCTG |
59.948 |
20 |
109 |
807 |
915 |
| 2 |
GACGTCCTTCTTCACACCGT |
60.159 |
20 |
CTCTTCCCATTTCTTCGCTG |
59.948 |
20 |
130 |
786 |
915 |
| 3 |
CTTCACTTCCACAAACGGCT |
60.291 |
20 |
CTCTTCCCATTTCTTCGCTG |
59.948 |
20 |
229 |
687 |
915 |
|
|
