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Simple sequence repeat (SSR)
>UN40152
GGCAGCGAAACATCGAATCCAGCTTAGGAGAATGGCGATGTAAAACTATTTGTTCTCACAGACCACAAAATTTTTTTTAAAAAAAAAACTTGAC
AGAGAGAGAGAGAGAGTTGGACTTGTTTACCATCCTACAGAGCTAATGAAGTATCATAGTTCCATTCATAGAAGCAAAGCATAATACTCTCATG
AAAACTTTTAAAATTAAAAAAAAAAGAAATGACAAGTGACAAGAAGACAAGAGTGAGAGAGGGTCCCAATGCTAGTTGTGTCCTCCTGGTTCGT
CATCATCATCATCATCATCGTGAAGGTGTTTGAGGGCATTGAGAATCCGAGCTTCCATTTTCCTGACACGAGCAAGCAACCGATTGCAAGATGT
AAGGTAACCCTTAACCTTGTCCTTCTGGCATTGATCCACATAAACCTCCATATCCCTCAGGAGATCCATCAGCTCGTCAGCCACCTGAGAATAC
TCCATGACCCGACCCGGGTCTCTCTCCACCACCTCCTCCAACTCTCTCCTCGCCCTTTCTAGCCACTCGGCGGACAAGCGAATCCGTGCTTTCA
GGGATTCGTAGTTACCATCATCAGAGGAGTAGAGTTTGAAGACAGTACCTGGCTTGGTTTTGTAAAAGTGGAGAGCTTTGACATGACCCCCCGG
CTTGTGCTTCAAAGGTAGCTCTTTGACCGCACCTTCTTCCTCCAGTTCTAGATCAACAGGAGCGGTGATGATTGGAGGGTATCGGTGGAGGCGA
AGGAAGAACCAGGCGGAAGCTGCGACTGCCACGGCGGGAACGATCAAGTGGCCCCCGAATTGGATTTTGAAACCATTACTATTACTAGGAGGAG
GAGGAGAAGAAGGGTCAGAGGGTGAAATGGACGGAGAAGTGATGGCGAAGAGAGAAATAGGGTTGGAAGGTCTGTAATAATGGTGAAAGGAGGA
GGGCATCTTGTACTGACAGTACGCCTTCACCACGCTTCCCATCTTTCCCCCAACTTGTAAAATGTTTTTTCGACTAATTCAATTTACTACCAAC
AACCCTAAACCCCCAATTTTCATCCTTTTGCTGCACCCCGCCACCACAATCAATCTTCTTCTTCTCTCCAGGCGACTACAAGTTTTTTCTTCTT
TTTTTCTTTTCTATATCC |
Primers for UN40152 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGAAACATCGAATCCAGCTT |
60.214 |
20 |
ACGAACCAGGAGGACACAAC |
60.009 |
20 |
277 |
6 |
282 |
2 |
CGAAACATCGAATCCAGCTT |
60.214 |
20 |
ATGACGAACCAGGAGGACAC |
59.969 |
20 |
280 |
6 |
285 |
3 |
CGAAACATCGAATCCAGCTT |
60.214 |
20 |
CGAACCAGGAGGACACAACT |
60.151 |
20 |
276 |
6 |
281 |
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