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Simple sequence repeat (SSR)
>UN40157
TTGAGTTCCTCTGCATTGAACAATAAAAGGCAAAAGGATGAAAACTGTAGCTCACATACATTAAAGTTGTTGGAAGATTCGAGTCTTAAGTTTA
CTATTTTCTGTACTTTCTCACATACGAGATCAAAGACGACAGAAGATAAGAGAAGAAAACAAGAGTCTAATCTATGTTATGGAAGCCAGGGAGA
AGTGAAGTTATGAAGCCGAAAACTATCATCTGAATCTCTTTCACTATTCCCCACCACTGATTCCCCTGTTGTCTTGCATCCACATTTTCATTTG
CGTTTGCGCTGTTCCCGTTTTCACCTTCATTCTCTTGTCCCTCGGGAACCGCATCTCCGTTAAGTGGGACTGCAGCAGCGGGGTCATTATCAGC
TCTGGCAGCAACAGGAGGTTGAGGTTGAGGTTGAGGTCGAGGTGGGGGTACTGCGGCTCTATGCATACCCTGTGAGAGCCATCGGACAAAAGGT
GCAAGGGCTCCAGTTTGGTATAAGTAAATGATGGTAGCGAAAATCACAAGGACAGCAAGCCTCTGTCTCGAACCATCTTGGTTGAAGAGAAAGA
TGACAGCAGCAAGCTTGAGGATGAGGAATATGTCAAGCTGAAAGGCGATCTCGAATCTCCGTACAACAACTTGCCTTTGTTGTTGTTGTGCAGG
CTGCTGCTGCTGCTGACCTTGCCCAGCTTGGGCTTGGTTCTCTCCCCCAGCCTCAGTCTCATTGTTTGGTCTAGCTGCGGGAAGATTGTAAGTG
AGAGGGATAAGATAATTAGAGGGAAGAGCTCCAAATTGATGATGATGCACAGGAACCGCATAGATCCCAGCTCCACGGTTCCTTTGTTCATCGT
ACTGCCCTGGATTCAATCCGGGAACAAGACCCGGATAAATTGGAGCTCCTTCTAGATTCTGAGGCTTGATCCCAGAATCATCGGGTTTCTTATC
AGAAGGAGAAGGTTGCTGCTGTGACGCTGAAGAAGATGTCTTCTGGGGTTCTTCCGCCATTTTTATCAAAAAGGATTGTACTGTATACACGACG
CAGAAGCTCTTTCTCTATTGAATCCGCCAAATCAAATCGTTTGTTTATTCCCCCTTTGTTATCC |
Primers for UN40157 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGCAAGCTTGAGGATGAGGA |
60.096 |
20 |
CAATCTTCCCGCAGCTAGAC |
59.978 |
20 |
175 |
572 |
746 |
2 |
ATCACAAGGACAGCAAGCCT |
59.874 |
20 |
CAATCTTCCCGCAGCTAGAC |
59.978 |
20 |
234 |
513 |
746 |
3 |
CGAAAATCACAAGGACAGCA |
59.84 |
20 |
CAATCTTCCCGCAGCTAGAC |
59.978 |
20 |
239 |
508 |
746 |
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