 |
Simple sequence repeat (SSR)
>UN40168
GGAGAAATTAAGGTTCAATAATAAAAGATAGATTCAAGAAACTACTCAAGCACGACGAAAACACACACTTATTACTTGTAAAATAATAACGTTT
CAGTAGAGAAAACTAGTAAAACAGTCTAAACAAGCCAACAGTATATATCATATAAAGGTCTTGTTATTGTTGTGTGTGGTGTAATGTTTTACTC
CCATCGTTCTTCCCAAAAGTAAGTCCACTCGGAAGCGTTCAACGTCGTTTTGCCGTCTGCTGCAACAAGATCATAAGGAGAGTCCTCAGAGAAT
TCTGTCGGTATCGATTTCCAGTGAAGCGAAGGTCTCCACTCCGCTTCTTTAACAACTCTCAGTATCTCTGCAGCCACAAGTTTGCTTCCTTGTG
CTGACAAATGAATCCCATCTGTGAAGCAAACGGTTTCCCAGTCATCTGCTTTCTGAAAAGCAGAGTAGAGATCAACTACTTGTAAGCCGAGCTC
TTTGCACAGCTCCACACAAGCGTCTGAATACGTCTTGCAGAGCTCGTTTGTGCGGATTACCTCGCTCAAGTATGGGCTCTGGTTTTGACGAACT
TTGGCTTCGTCCACTGGAGGACAACTAAGGAATATGATACGAGTAGAGTCTGAAAGGCTCTGAAGATGAAGAGCGATCTTCTTCATGTTTTGGA
CGTATTCAGGTAGTGGGACGTGAGGTCCTAGACCAGAAGGGTGAGGCCCCATTGAGTCGTTTCCTCCAAAATAGACAACTACCAGAGAAGGTTG
TACCAAGGCATCCTTGGGGAACACTTTGTCAATAACTTCCAAAGCACGAGTTGAGTTCCATCCATAATATCCTCTCAGAATGACGTCGGCCTTG
CGAGCATAGACCTAAGCTCATCTGGACGATGGATGATCCAAAAAGAACGATCTGAGGCCTCGACGGTCCAACCATTGTCTCTCTCTCTAAGACA
CACAATCACGTATCTCTTCCTCTGTTCACAAACAACTGTAACTCGCCCCTTTCTTTCTCTCCTTCTCTCTTTCTCTGTATCGATCTCGCTCACT
CTCTGCGGGATTAAATACACGAATGTACTATTTCATTTATTATTATTATTACTTTTTGAATAGCAGAAAACTCAAATCC |
Primers for UN40168 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AACTCGCCCCTTTCTTTCTC |
59.827 |
20 |
GGATTTGAGTTTTCTGCTATTCAA |
58.863 |
24 |
134 |
980 |
1113 |
| 2 |
AGCTCATCTGGACGATGGAT |
59.642 |
20 |
GGATTTGAGTTTTCTGCTATTCAA |
58.863 |
24 |
253 |
861 |
1113 |
| 3 |
GACGGTCCAACCATTGTCTC |
60.372 |
20 |
GGATTTGAGTTTTCTGCTATTCAA |
58.863 |
24 |
206 |
908 |
1113 |
|
|
