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Simple sequence repeat (SSR)
>UN40193
GTACCAAAAACACACTATTAAATTAGATGTGAGAATAAAGTTACATTCACATTTTGTTTTCTGATCAATGGTGAATTACTATTGATCTGCATAA
ACTTCAGCAGATGAACGTGTGATCAAAACACAACAACACCTTACAGTTCCTTTTGAAGAGAAAAGAAAATGATGACAGTTCTTTATGTACAGTG
TGCAGAGCCACCAAGCCATCCATGACACCAGTAATTAGGTGCTTGAGCTACCGAGATCAAAGTCCATTGTGTAATCATACTCGATTGTTGGAAT
AACTGATGCCATGAACTTCAAGAACAGGAAAAGGTACTTGTCAACTTCAGGTTCTACTCCACGGGACATTAAAACATCAATGATCTTCTTCATA
ACAGCTCCATGTCGACATGGATGGACTGAAGCATGTTTCCCAGGCAAGTGTGGATGATCTTCTATTGTGACCGTCTTACGAGCATGGTCTTGGC
TTACATCCTCCATTACAAGTTCAGGTTGCAGCAGCATCCTTGACTCATCATAACCGGTTAGCCAAACACGAGGAGTTTGGTAATACTTATCATA
CGTTATGCTGATATCATAAGTACGAGTTCGGAGAATGTTATCGTCATCAGGTTCATGAGCAACAAGATAAGTTGACTGAAGAGTTGCCGGATCA
TTTTCCACCACATTGTCAGCCTCATCAAACTCTTCCATATCTGGAATATCATCATCATCATCCCCAGCTCCAAAATACGTAGGTATCGACCGTA
TACCGCTTCTCTCGTTTATATCCAAGGCATCCATTGACGGCAAGTTCTCATCTTCACTGCCTTTATCTTTAGGTTTCCCATGTGTAGCAAGCCA
ACCATCATTATCTTCGTCATCAACCAACACTTCACCTCCAGCAGCTTCGTACTCCTCTGCCACAGATGCAGCTCTCCGTAGACAAGGTACGTTT
CTAGTAATCAAAAACTGTTTCTCCAAGGGTAAGTATGGCTTCCTCTTGCTTGGGTCACCAGATTCCCATGACCAAGTAGGGCACTTGGAGACGA
GATTGTCTCCGGCGAGGACGAACTCGCTGACGCTGAGTACTCCCTTCTCCTTGAAAGCCGTGATCGTGCGAGGACCGGTCATCCTCTCCACCGT
GCCTTTGAATGCTTCGTGAAGCTTTTGCGAAAACATTGTTTTGAGTGATCTCTCGCGATTGAGTTTGGAGAATCTGATCAATTTTTTAGGTATT
AATCGAGAGAGAACGGAGTTCTTGTCCGTATGGAAGACACGACTTCTTATCC |
Primers for UN40193 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGAAGAGTTGCCGGATCAT |
60.218 |
20 |
GTGGCAGAGGAGTACGAAGC |
60.02 |
20 |
270 |
640 |
909 |
2 |
CTGAAGAGTTGCCGGATCAT |
60.218 |
20 |
AGCTGCTGGAGGTGAAGTGT |
60.057 |
20 |
253 |
640 |
892 |
3 |
CTGAAGAGTTGCCGGATCAT |
60.218 |
20 |
GAGTACGAAGCTGCTGGAGG |
60.156 |
20 |
261 |
640 |
900 |
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