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Simple sequence repeat (SSR)
>UN40202
AATAAAAAACCAACGATTCTTGGATTGAATATACTCGGGGCAAATTCAAGAACCTGTTCTAGCAAGGATGATTAGCCCAAGAGATCACGAATAC
AATAACATTGTGTTTTTTTTTTTTTCTCTTTTCCTCGCCAAAAAAGGAAAAAAAAATATAACGTTGAGGTTTCAAGTAAAAAAAAAGAAAATCT
ACCAACTTGTGTTTTGAGCATATAAGTCTTGAGGGTTAGATTCAACTACATCATTATGCGAAGGACTGCGAGTCCAACTGCTGAAATGGAGACC
AGTGTACCGATGCAGTATTTGATTACTTCGTATTTGGCCGCTTCTAGCTGAGCTCTCAATGCATGAATTTCTCTGTCAAGCTTGTTCGTGAGGT
TTGTTGTTTCTGAATTCTGATTAGCTAGCTCATCACGTATCCGGCCTCTTTCAAGATTCAAATCCAAGCGTTGTCCAGCTGTGACCTTATCAAT
TTCGTACCTTAGCTCGCTTCTCATCTTTTCTATATCCCCTCTTAGTTTTTCGGTCTCCCGTTGTAAAACAGTAAAATGATGCTCCTGAGAGCTT
TTGACTTCAGGTTTAAATTTGGAGGGATTAGAATCTTGGAGCATTTCAATCTTCTGCATCTCAGCCTTGGAAACAAAGGATTCAGAGACGTTCT
CCAAGCTATCATTCAAAACCTCAGTGATTGCAGAAGTAATGGCCTCAGCTTGTTTTGATGGAACACCTTGTGCTTCAAGACTCCTCACCAGAGC
CAAGGTATCGACGAGAAAAGCACGCTTCCCATTGACTTTGGTGAGCTCCGAGATTTGCCGGAACTGGAAGGGACGCCGATCAATTAAGCCGTAG
GAGGGGGAGGAGGAGCCCAGACCTCCTCGGGGTCTGGCGATTGAGAGCGCGGATTGAGCTCCTAACAGAGCCAGTCGCCTTGACAAGTTCATCG
ATCAACAACGGAATCGTATTTCGTCGACGGAGAATCAGGAAAAGCGGATGCGATTGATTTGATTTGATTTGATTTGATGAAGAAGAAGGTTGAT
GAGCCTTGTGGAAAGGGTTCCC |
Primers for UN40202 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCGGATTGAGCTCCTAACAG |
59.978 |
20 |
ACCCTTTCCACAAGGCTCAT |
60.883 |
20 |
158 |
895 |
1052 |
2 |
CAGTCGCCTTGACAAGTTCA |
60.025 |
20 |
ACCCTTTCCACAAGGCTCAT |
60.883 |
20 |
135 |
918 |
1052 |
3 |
TTCATCGATCAACAACGGAA |
60.049 |
20 |
ACCCTTTCCACAAGGCTCAT |
60.883 |
20 |
119 |
934 |
1052 |
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