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Simple sequence repeat (SSR)
>UN40241
GGTTCCAGTTAACAAATTACAAATCGAGAGACCTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTGCTTCCCTTCCGCCTGCCAATT
CGTCTCAAGCTATAGCAGAGCTTGTCTTGGAGGAGCCTGCGTGCTAGATTTTTTTCTCCTTGTCTCGATTCTGGATCTTGAGAGTTAGAAGCAG
CTGATTCCTGGAACTAACCAACCAACCATGATGTCCTTCGAAATGAATGACCGCAAAAAAATCGGGTTAGGGCTGACTGCATTTGGAGTCTTTT
TCTCCTTTTTGGATGTTGTCTTTGTCTTTGATAAGGGTTTACTTGCCATGGGAAATATTCTTTTCATCTCTGGGGTTAGTCTTACCATTGGCCT
CAAGTCTACCATGCAGTTTTTCACCAAGCGTCAAAACTATAAGGGAACAATCTCTTTTGGTGCTGGCTTCTTCTTTGTTGTCATTGGATGGCCT
GTCCTTGGAATGATGTTGGAGACCTATGGCTTTTTTTGTACTCTTTAGCGGCTTCTGGCCAACCTTGGCAGTTTTCGCACAAAAGATACCCTTT
CTCGGTTGGATCATTCAGCAACCTTATATAAGATCGTTCTTTGACAAGTACCGGGGCAAGCGTGTGCCCGTCTAGTCACCGCCCAAGTTGAGAG
AAAATTCACTGAGCTAGATGCAGCAGAGCAAACGATTAAAATATTTTGGAAGGAGAGGTTGGTATACTTGTCCACAACTTTGGTATAAACGTAA
ACCCGTAGGAGAAATAAAATAGCGTGGAGCAACTTGAAGATTTGTACTTTTAAAAGACTAACTCAGTGACTTAATGATGGATTATAATCGTTTT
GGTAC |
Primers for UN40241 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACAAATTACAAATCGAGAGACCT |
57.523 |
24 |
AGTCAGCCCTAACCCGATTT |
59.962 |
20 |
256 |
11 |
266 |
2 |
TTCCAGTTAACAAATTACAAATCGAG |
59.853 |
26 |
AAAATCTAGCACGCAGGCTC |
59.62 |
20 |
144 |
3 |
146 |
3 |
TTCCAGTTAACAAATTACAAATCGAG |
59.853 |
26 |
TAGCTTGAGACGAATTGGCA |
59.566 |
20 |
104 |
3 |
106 |
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