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Simple sequence repeat (SSR)
>UN40337
TTTTTATAAAACCCTACCTTTGAAAATCTCGACTCTCTCTCTCTTTCGCCGCCGACGACAGTAAAAATGGGTGCTAAGGCAAAAAAAGCCCTGA
AGAAGAACATGAAGAAGATCTCTGCTTCCGCTGCTACTTCTTCCTCATCTCAGCTAGCTATTCCCCAGAAACCCAAACCGTCAGCTGACTTTTT
GCCACTAGAAGGCGGTCCAGCTCGAAAAGCTCCAGCGACCAAACCTATCGAGAACAAATCCACCGTGCTGTACATCGGTCGCCTCCCTCACGGT
TTCTACGAGACTGAGATTGAAGCTTTCTTCACACAGTTTGGAACAGTAAAGAGAGTCAGAGTCGCACGAAACAAAAAGACTGGGAAATCAAAAC
ATTTTGGATTCATTCAGTTTGAGGACCCTGAGGTGGCGGAGATTGCAGCGGGTGCAATGAATGACTATCTGTTGCTCGAGCACATGCTTCAAGT
CCGTGTTATTCCACCAGAGGATGTTAAACCTAATCTGTGGAAAGGTTTTAAGTGCCAGTACAAACCAGTTGATTGGGTTCAGATCGAGCGTAAA
CAACACAACAAGGAAAGGACACTGGAAGAACATAGGAAAATGCTGAACAAGTTGTGAAACGTGATCAGAAAAGAGAAAGAGAATCGAAGCTGCT
GGAATAGAATATCATGCCCCGAGCTTGTTGGAATACCAGCATACCTAGAGATCAAGTTTAGTGAGACTAGTTACTGGTTTGGATAGCTTTGTTT
TGTATGTGGTATCTGGTTTTTGTACTTTGACATCGGATCCAAACTCAAACT |
Primers for UN40337 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAACCCTACCTTTGAAAATCTC |
57.046 |
23 |
CGCCTTCTAGTGGCAAAAAG |
60.011 |
20 |
195 |
8 |
202 |
2 |
AAAACCCTACCTTTGAAAATCTC |
57.046 |
23 |
AGAAGTAGCAGCGGAAGCAG |
59.92 |
20 |
128 |
8 |
135 |
3 |
AAAACCCTACCTTTGAAAATCTC |
57.046 |
23 |
AAGTAGCAGCGGAAGCAGAG |
59.92 |
20 |
126 |
8 |
133 |
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